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BaseInfo

ncRNA ID	novel_jre_miR390
Species	Juglans regia
Class	miRNA
Genome position	NW_017443591.1:1448936-1449098 [-]
Reference genome	wgs.5d
Source	SRR1170956
Length	23
Mature sequence(if miRNA)	1 - AUUCCACAACUGUAUGUAACAUU - 23
Stem-loop(if miRNA)	--  A   U      C   -                           -       A   AUAAAUAUA  AUU   --A      GAA   UG UAU UGCAGU GUG AGUGUGCAAGUGUCGUGCAGUCGCUUU AAAAAAA UGA         GG   CAC   UGAAAA   A   || ||| |||||| ||| ||||||||||||||||||||||||||| ||||||| |||         ||   |||   ||||||   U   AC AUG AUGUCA CAC UUACGCGUUUGCGGCACGUCAGCGAAA UUUUUUU ACU         CC   GUG   AUUUUU   U UU  A   U      A   C                           C       C   ---------  -AU   AUA      AAA
Stem-loop sequence	UGAUAUUUGCAGUCGUGAGUGUGCAAGUGUCGUGCAGUCGCUUUAAAAAAAAUGAAUAAAUAUAGGAUUCACAUGAAAAGAAAUUAAAUUUUUAAUAGUGUACCUCACUUUUUUUCAAAGCGACUGCACGGCGUUUGCGCAUUCCACAACUGUAUGUAACAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018964869.1	ncRNA:23   UUACAAUGUAUGUCAACACCUUA   1   ||||*|||||||||||*|||||| targets:1052   AAUGCUACAUACAGUUAUGGAAU   1074 Target Full Sequence	2.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC108990784), mRNA	NA	coding protein	psRNATarget
XM_018980788.1	ncRNA:23   UUACAAUGUAUGUCAACACCUUA   1   ||||*|||||||||||*|||||| targets:1581   AAUGCUACAUACAGUUAUGGAAU   1603 Target Full Sequence	2.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018980787.1	ncRNA:23   UUACAAUGUAUGUCAACACCUUA   1   ||||*|||||||||||*|||||| targets:1654   AAUGCUACAUACAGUUAUGGAAU   1676 Target Full Sequence	2.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018980786.1	ncRNA:23   UUACAAUGUAUGUCAACACCUUA   1   ||||*|||||||||||*|||||| targets:1878   AAUGCUACAUACAGUUAUGGAAU   1900 Target Full Sequence	2.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X1, mRNA	NA	coding protein	psRNATarget