ncRNA ID | novel_jre_miR384 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443397.1:590745-590906 [+] |
Reference genome | wgs.5d |
Source | SRR1170956;SRR1170958;SRR1170959 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUUUGGCUAAUAGAUGGAUAAUC - 24 |
Stem-loop(if miRNA) |
--         AAU         A      A  A      AGC   GA       -C    CAUU      U  AA     GA   AUUUUGGCU   AGAUGGAUA UCCAAU UG GGUUAG   AUU  CAAUGGU  UAGC    GCCAAG CC  AAUUU  C   |||||||||   ||||||||| |||||| || ||||||   |||  |||||||  ||||    |||||| ||  |||||   UAAAACUGA   UCUAUCUAU AGGUUA AC CUAAUU   UAG  GUUACCA  AUUG    CGGUUU GG  UUGAA  U AA         AAC         C      C  -      --A   AG       AA    AAAU      U  AG     AA |
Stem-loop sequence | AUUUUGGCUAAUAGAUGGAUAAUCCAAUAUGAGGUUAGAGCAUUGACAAUGGUCUAGCCAUUGCCAAGUCCAAAAUUUGACUAAAAGUUGAGGUUUUGGCUAAAGUUAAAACCAUUGGAGAUAUUAAUCCACAUUGGACUAUCUAUCUCAAAGUCAAAAUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018956604.1 |
|
2.5 | PREDICTED: Juglans regia Golgi SNAP receptor complex member 1-1-like (LOC108984599), mRNA | NA | coding protein | psRNATarget |