ncRNA ID | novel_jre_miR377 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017442862.1:352586-352672 [+] |
Reference genome | wgs.5d |
Source | SRR1170956;SRR1170959 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CUCUUAGGCAAUGUGGGAUCC - 21 |
Stem-loop(if miRNA) |
--    U              --       UAAU     AGA   A   CUCU AGGCAAUGUGGGAU  CCCAUUA    AUUCU   UUG G   |||| ||||||||||||||  |||||||    |||||   |||   GAGA UCUGUUACACUCUA  GGGUAAU    UAGGA   AAC U AG    U              GU       -UGU     --G   A |
Stem-loop sequence | CUCUUAGGCAAUGUGGGAUCCCAUUAUAAUAUUCUAGAUUGAGUACAAGAGGAUUGUUAAUGGGUGAUCUCACAUUGUCUUAGAGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018951467.1 |
|
1.5 | PREDICTED: Juglans regia haloacid dehalogenase-like hydrolase domain-containing protein 3 (LOC108980528), transcript variant X1, mRNA | NA | coding protein | psRNATarget |