ncRNA ID | novel_jre_miR371 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017440139.1:34489-34579 [+] |
Reference genome | wgs.5d |
Source | SRR1170956;SRR1170957 |
Length | 22 |
Mature sequence(if miRNA) | 70 - UGCUCACUCUCUAUCUGUCACC - 91 |
Stem-loop(if miRNA) |
--       -             A  U     UUCUUGCAUAUAUG   UGACAGA AGAGAGUGAGCAC CA GGUAU              C   ||||||| ||||||||||||| || |||||   ACUGUCU UCUCUCACUCGUG GU UCGAA              C CC       A             C  C     GUUCGUACUUUGGC |
Stem-loop sequence | UGACAGAAGAGAGUGAGCACACAUGGUAUUUCUUGCAUAUAUGCCCGGUUUCAUGCUUGAAGCUCUGCGUGCUCACUCUCUAUCUGUCACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018958349.1 |
|
2.5 | PREDICTED: Juglans regia shaggy-related protein kinase epsilon-like (LOC108985888), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018977338.1 |
|
3.0 | PREDICTED: Juglans regia transcription factor GTE4 (LOC109000469), mRNA | NA | coding protein | psRNATarget |