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BaseInfo

ncRNA ID novel_jre_miR354
Species Juglans regia
Class miRNA
Genome position NW_017443009.1:2232383-2232489 [-]
Reference genome wgs.5d
Source SRR1168796;SRR1170959;SRR1168795;SRR1168883;SRR1168886
Length 24
Mature sequence(if miRNA) 84 - UUCUCCCCAAGGCCUAUCUUUAUU - 107
Stem-loop(if miRNA) --    C  C                   - UUU     AUUUC   CU     A
  UUCU CC AAGGCCUAUCUUUAUUUUU C   CAUUG     GUU  GCAUC A
  |||| || ||||||||||||||||||| |   |||||     |||  ||||| U
  AAGA GG UUCCGGAUAGAAAUAAAAA G   GUGAU     UAA  UGUGG U
AA    A  A                   C --U     -GACA   CC     U
Stem-loop sequence UUCUCCCCAAGGCCUAUCUUUAUUUUUCUUUCAUUGAUUUCGUUCUGCAUCAAUUUGGUGUCCAAUACAGUAGUGUGCAAAAAUAAAGAUAGGCCUUAGGAAGAAAA