ncRNA ID | novel_jre_miR352 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017388777.1:13082-13185 [-] |
Reference genome | wgs.5d |
Source | SRR1170956;SRR1170964 |
Length | 24 |
Mature sequence(if miRNA) | 81 - UCGUGCAGUCACUUUGAAAAAGAG - 104 |
Stem-loop(if miRNA) |
--          A           ---------A           UAUU   A  U   UCGUGCAGUC CUUUGAAAAAG          GUGGGAUCCGC    AAA AA U   |||||||||| |||||||||||          |||||||||||    ||| || A   GGUACGUCAG GAAACUUUUUU          UACCCUGGGUG    UUU UU A GC          C           CACUUAUUUA           UACU   C  U |
Stem-loop sequence | UCGUGCAGUCACUUUGAAAAAGAGUGGGAUCCGCUAUUAAAAAAUUAAUUUCUUUUCAUGUGGGUCCCAUAUUUAUUCACUUUUUUCAAAGCGACUGCAUGGCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018959423.1 |
|
2.5 | PREDICTED: Juglans regia high-affinity nitrate transporter 3.1-like (LOC108986715), mRNA | NA | coding protein | psRNATarget |