Search result

BaseInfo

ncRNA ID novel_jre_miR349
Species Juglans regia
Class miRNA
Genome position NW_017388947.1:1868696-1868801 [-]
Reference genome wgs.5d
Source SRR1170955;SRR1170966
Length 23
Mature sequence(if miRNA) 1 - UAUGGAUGAUAAGUAGAAUAACU - 23
Stem-loop(if miRNA) --AA        C       U           CCAGACAUAAUUUUU     U
    AUUCUACU AUCAUCU UACACCACACA               AAAUU U
    |||||||| ||||||| |||||||||||               |||||
    UAAGAUGA UAGUAGG AUGUGGUGUGU               UUUAA U
UCAA        A       U           AAAUCAUUCUCUUUU     A
Stem-loop sequence AAAUUCUACUCAUCAUCUUUACACCACACACCAGACAUAAUUUUUAAAUUUUUAAAUUUUUUUCUCUUACUAAAUGUGUGGUGUAUGGAUGAUAAGUAGAAUAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018979806.1
ncRNA:23   UCAAUAAGAUGAAUAGUAGGUAU   1
  ***|||||||||||||||||=|*
targets:1015   UUGUAUUCUACUUAUCAUCCGUU   1037

2.5 PREDICTED: Juglans regia uncharacterized LOC109002169 (LOC109002169), mRNA NA coding protein psRNATarget