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BaseInfo

ncRNA ID novel_jre_miR348
Species Juglans regia
Class miRNA
Genome position NW_017388935.1:520692-520802 [-]
Reference genome wgs.5d
Source SRR1170955;SRR1170960;SRR1170961;SRR1168881;SRR1168883
Length 24
Mature sequence(if miRNA) 1 - UUUCAAAGUGAUUGUGCGGCACUU - 24
Stem-loop(if miRNA) --  AU  UG    AU    -         GAAUAAAUAAG      --A          AA
  GU  CG  CAAU  CUUU AAAAAAAGU           AGAUUC   UAUUGGAAAA  A
  ||  ||  ||||  |||| |||||||||           ||||||   ||||||||||  A
  CA  GC  GUUA  GAAA UUUUUUUUA           UCUGAG   AUAAUUUUUU  U
UU  CG  GU    GU    C         -----------      AUG          AA
Stem-loop sequence GUAUCGUGCAAUAUCUUUAAAAAAAGUGAAUAAAUAAGAGAUUCAUAUUGGAAAAAAAAUAAUUUUUUAAUAGUAGAGUCUAUUUUUUUUCAAAGUGAUUGUGCGGCACUU