ncRNA ID | novel_jre_miR345 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017388810.1:2371-2478 [+] |
Reference genome | wgs.5d |
Source | SRR1170955;SRR1170960;SRR1170961;SRR1170966;SRR1168881;SRR1168883 |
Length | 24 |
Mature sequence(if miRNA) | 85 - UUUCAAAGUGAUUGUGCGGCACUU - 108 |
Stem-loop(if miRNA) |
--UUA  AU                 --     ------  GU    UAUU      U      CU  GCAGUCAUUUUGAAAAA  GAGUA      AG  UUAU    AAAAAA U      ||  |||||||||||||||||  |||||      ||  ||||    ||||||      GG  UGUUAGUGAAACUUUUU  CUUAU      UC  GAUG    UUUUUU A UUCAC  CG                 CA     UUAUGC  UG    CACU      A |
Stem-loop sequence | UUACUAUGCAGUCAUUUUGAAAAAGAGUAAGGUUUAUUAUUAAAAAAUUAAUUUUUUUCACGUAGGUCUCGUAUUUAUUCACUUUUUCAAAGUGAUUGUGCGGCACUU |