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BaseInfo

ncRNA ID novel_jre_miR345
Species Juglans regia
Class miRNA
Genome position NW_017388810.1:2371-2478 [+]
Reference genome wgs.5d
Source SRR1170955;SRR1170960;SRR1170961;SRR1170966;SRR1168881;SRR1168883
Length 24
Mature sequence(if miRNA) 85 - UUUCAAAGUGAUUGUGCGGCACUU - 108
Stem-loop(if miRNA) --UUA  AU                 --     ------  GU    UAUU      U
     CU  GCAGUCAUUUUGAAAAA  GAGUA      AG  UUAU    AAAAAA U
     ||  |||||||||||||||||  |||||      ||  ||||    ||||||
     GG  UGUUAGUGAAACUUUUU  CUUAU      UC  GAUG    UUUUUU A
UUCAC  CG                 CA     UUAUGC  UG    CACU      A
Stem-loop sequence UUACUAUGCAGUCAUUUUGAAAAAGAGUAAGGUUUAUUAUUAAAAAAUUAAUUUUUUUCACGUAGGUCUCGUAUUUAUUCACUUUUUCAAAGUGAUUGUGCGGCACUU