| ncRNA ID | novel_jre_miR339 |
| Species | Juglans regia |
| Class | miRNA |
| Genome position | NW_017443591.1:3001991-3002138 [-] |
| Reference genome | wgs.5d |
| Source | SRR1170955;SRR1170965 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AUGAUGAGAGUUGAGAUGAUGAAU - 24 |
| Stem-loop(if miRNA) |
-- UC A G A A UGA AAUUAUUUAUUA UCAUCAUUUUAACUUUCAUCGU UUUCAU AUCUUAU AUGUG UAUUA AUGAU A U |||||||||||||||||||||| |||||| ||||||| ||||| ||||| ||||| | A AGUAGUAGAGUUGAGAGUAGUA AAGGUA UAGAGUA UACAC GUAGU UACUA C A UA GA G A C C -UC AAGUGUUCAUUU |
| Stem-loop sequence | UCAUCAUUUUAACUUUCAUCGUUCUUUCAUAAUCUUAUGAUGUGAUAUUAAAUGAUUGAAAAUUAUUUAUUAUAAUUUACUUGUGAACCUAUCAUCUGAUGCCACAUAAUGAGAUGAUGGAAAGAUGAUGAGAGUUGAGAUGAUGAAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_018983133.1 |
|
2.5 | PREDICTED: Juglans regia GDSL esterase/lipase At3g27950-like (LOC109004557), mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_018950054.1 |
|
2.5 | PREDICTED: Juglans regia protein CONTINUOUS VASCULAR RING 1-like (LOC108979380), mRNA | NA | coding protein | psRNATarget |