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BaseInfo

ncRNA ID novel_jre_miR338
Species Juglans regia
Class miRNA
Genome position NW_017388904.1:380526-380628 [+]
Reference genome wgs.5d
Source SRR1170955
Length 24
Mature sequence(if miRNA) 1 - AAUAUAGGUCAUGUGGUUUGAGCC - 24
Stem-loop(if miRNA) --AA       C           GC    C   -----GG   GUUAUAAAUGG
    UAUAGGU AUGUGGUUUGA  CUUA AUU       GGU           U
    ||||||| |||||||||||  |||| |||       |||
    GUAUCCA UGUACCGAAUU  GAGU UAA       CUC           A
AACA       C           UA    A   AAAACAA   UAUCUGAGACU
Stem-loop sequence AAUAUAGGUCAUGUGGUUUGAGCCUUACAUUGGGGUGUUAUAAAUGGUAUCAGAGUCUAUCUCAACAAAAAAUAUGAGAUUUAAGCCAUGUCACCUAUGACAA