ncRNA ID | novel_jre_miR335 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443568.1:552534-552706 [-] |
Reference genome | wgs.5d |
Source | SRR1170955;SRR1170959;SRR1170964;SRR1170966 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAUGUAAGGAUGAUAAGUAGAACU - 24 |
Stem-loop(if miRNA) |
--               C             ---------------U     U     A    U     -------     AAUGUGAGAUAUAUGG   UUUUACUUAUCGUCC UACAUCAUAUAUU                UUAUU UUUUU UUUU UUCUU       UUUCA                A   ||||||||||||||| |||||||||||||                ||||| ||||| |||| |||||       |||||                U   AAGAUGAAUAGUAGG AUGUAGUGUGUGG                AAUAA AAAAA AAAA AAGAA       AUUUA                G UC               A             UAUAUAUUAAAAAAAU     U     C    U     UGAUUUA     CUUAAGAAGAUGAAUA |
Stem-loop sequence | UUUUACUUAUCGUCCCUACAUCAUAUAUUUUUAUUUUUUUUAUUUUUUUCUUUUUCAAAUGUGAGAUAUAUGGAUGAUAAGUAGAAGAAUUCAUUUAAUUUAGUAAGAAUAAAACAAAAAUAAUAAUAAAAAAAUUAUAUAUGGUGUGUGAUGUAAGGAUGAUAAGUAGAACU |