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BaseInfo

ncRNA ID novel_jre_miR335
Species Juglans regia
Class miRNA
Genome position NW_017443568.1:552534-552706 [-]
Reference genome wgs.5d
Source SRR1170955;SRR1170959;SRR1170964;SRR1170966
Length 24
Mature sequence(if miRNA) 1 - GAUGUAAGGAUGAUAAGUAGAACU - 24
Stem-loop(if miRNA) --               C             ---------------U     U     A    U     -------     AAUGUGAGAUAUAUGG
  UUUUACUUAUCGUCC UACAUCAUAUAUU                UUAUU UUUUU UUUU UUCUU       UUUCA                A
  ||||||||||||||| |||||||||||||                ||||| ||||| |||| |||||       |||||                U
  AAGAUGAAUAGUAGG AUGUAGUGUGUGG                AAUAA AAAAA AAAA AAGAA       AUUUA                G
UC               A             UAUAUAUUAAAAAAAU     U     C    U     UGAUUUA     CUUAAGAAGAUGAAUA
Stem-loop sequence UUUUACUUAUCGUCCCUACAUCAUAUAUUUUUAUUUUUUUUAUUUUUUUCUUUUUCAAAUGUGAGAUAUAUGGAUGAUAAGUAGAAGAAUUCAUUUAAUUUAGUAAGAAUAAAACAAAAAUAAUAAUAAAAAAAUUAUAUAUGGUGUGUGAUGUAAGGAUGAUAAGUAGAACU