Search result

BaseInfo

ncRNA ID novel_jre_miR332
Species Juglans regia
Class miRNA
Genome position NW_017443551.1:895175-895240 [+]
Reference genome wgs.5d
Source SRR1170955;SRR1170956;SRR1170970;SRR1168881;SRR1168883
Length 24
Mature sequence(if miRNA) 1 - AUGGAAAUUGAAAGUGCUUGCCCC - 24
Stem-loop(if miRNA) --     A UU          GC   C   CCG
  AUGGA A  GAAAGUGCUU  CCC AGG   A
  ||||| |  ||||||||||  ||| |||
  UACCU U  UUUUCACGAG  GGG UCC   U
GG     C CG          UA   A   UAC
Stem-loop sequence AUGGAAAUUGAAAGUGCUUGCCCCCAGGCCGAUCAUCCUAGGGAUGAGCACUUUUGCUCUCCAUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018970844.1
ncRNA:24   CCCCGUUCGUGAAAGUUAAAGGUA   1
  *****|||||=||||||||||||*
targets:154   UCAAGAAGCAUUUUCAAUUUCCAG   177

2.0 PREDICTED: Juglans regia probable NAD(P)H dehydrogenase (quinone) FQR1-like 2 (LOC108995308), mRNA NA coding protein psRNATarget