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BaseInfo

ncRNA ID novel_jre_miR331
Species Juglans regia
Class miRNA
Genome position NW_017443544.1:2690179-2690224 [-]
Reference genome wgs.5d
Source SRR1170955;SRR1170960;SRR1170966;SRR1170970;SRR1168881;SRR1168883
Length 23
Mature sequence(if miRNA) 1 - AAUGUGAGACUCUUGUAUUGCCU - 23
Stem-loop(if miRNA) --A       --           G
   CAAUACA  AGUCUCACAUU C
   |||||||  |||||||||||
   GUUAUGU  UCAGAGUGUAA U
UCC       UC           U
Stem-loop sequence ACAAUACAAGUCUCACAUUGCUUAAUGUGAGACUCUUGUAUUGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018983489.1
ncRNA:23   UCCGUUAUGUUCUCAGAGUGUAA   1
  *||=**|=|||||||||||||||
targets:2637   CGGUUUUGCAAGAGUCUCACAUU   2659

3.0 PREDICTED: Juglans regia uncharacterized LOC109004801 (LOC109004801), mRNA NA coding protein psRNATarget
XM_019004696.1
ncRNA:23   UCCGUUAUGUUCUCAGAGUGUAA   1
  *||=**|=|||||||||||||||
targets:2637   CGGUUUUGCAAGAGUCUCACAUU   2659

3.0 PREDICTED: Juglans regia uncharacterized LOC109021948 (LOC109021948), mRNA NA coding protein psRNATarget