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BaseInfo

ncRNA ID novel_jre_miR325
Species Juglans regia
Class miRNA
Genome position NW_017443522.1:91842-91951 [-]
Reference genome wgs.5d
Source SRR1170955
Length 24
Mature sequence(if miRNA) 1 - UUUCAAAAUGAUUGUGCGGCGCUU - 24
Stem-loop(if miRNA) --       U     -    AGU   A    AAUAAA   -GA ACCCACAUAAAA
  GCGCCGC CAAUC UUUU   AAA AGUG      UAC   G            A
  ||||||| ||||| ||||   ||| ||||      |||   |            A
  CGCGGCG GUUAG AAAA   UUU UCAC      AUG   A            A
UU       U     U    CUU   A    -CCCAG   AUA UUUUUUAAAUAA
Stem-loop sequence GCGCCGCUCAAUCUUUUAGUAAAAAGUGAAUAAAUACGAGACCCACAUAAAAAAAAAUAAAUUUUUUAAUAGUAGACCCCACUAUUUUUCAAAAUGAUUGUGCGGCGCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018994005.1
ncRNA:24   UUCGCGGCGUGUUAGUAAAACUUU   1
  ||*|*=|||==|||||||||||||
targets:1004   AAACAUCGCGUAAUCAUUUUGAAA   1027

3.0 PREDICTED: Juglans regia dnAJ-like protein slr0093 (LOC109012397), transcript variant X3, mRNA NA coding protein psRNATarget
XM_018994004.1
ncRNA:24   UUCGCGGCGUGUUAGUAAAACUUU   1
  ||*|*=|||==|||||||||||||
targets:1326   AAACAUCGCGUAAUCAUUUUGAAA   1349

3.0 PREDICTED: Juglans regia dnAJ-like protein slr0093 (LOC109012397), transcript variant X2, mRNA NA coding protein psRNATarget