ncRNA ID | novel_jre_miR325 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443522.1:91842-91951 [-] |
Reference genome | wgs.5d |
Source | SRR1170955 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUCAAAAUGAUUGUGCGGCGCUU - 24 |
Stem-loop(if miRNA) |
--       U     -    AGU   A    AAUAAA   -GA ACCCACAUAAAA   GCGCCGC CAAUC UUUU   AAA AGUG      UAC   G            A   ||||||| ||||| ||||   ||| ||||      |||   |            A   CGCGGCG GUUAG AAAA   UUU UCAC      AUG   A            A UU       U     U    CUU   A    -CCCAG   AUA UUUUUUAAAUAA |
Stem-loop sequence | GCGCCGCUCAAUCUUUUAGUAAAAAGUGAAUAAAUACGAGACCCACAUAAAAAAAAAUAAAUUUUUUAAUAGUAGACCCCACUAUUUUUCAAAAUGAUUGUGCGGCGCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018994005.1 |
|
3.0 | PREDICTED: Juglans regia dnAJ-like protein slr0093 (LOC109012397), transcript variant X3, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018994004.1 |
|
3.0 | PREDICTED: Juglans regia dnAJ-like protein slr0093 (LOC109012397), transcript variant X2, mRNA | NA | coding protein | psRNATarget |