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BaseInfo

ncRNA ID novel_jre_miR322
Species Juglans regia
Class miRNA
Genome position NW_017443495.1:652577-652733 [-]
Reference genome wgs.5d
Source SRR1170955
Length 25
Mature sequence(if miRNA) 1 - AGGUGUAAGGUGUAAGGAUUUUAUG - 25
Stem-loop(if miRNA) --       -      UG   U A    C   A    CG              A  UUU       --------   A    A
  UAAAAUC UUACAU  UAC C UUCA UUA UCAA  UGUAAUUUAUUAUU UU   AUUUUAU        UUA ACAU C
  ||||||| ||||||  ||| | |||| ||| ||||  |||||||||||||| ||   |||||||        ||| ||||
  AUUUUAG AAUGUG  AUG G AAGU GAU AGUU  AUAUUAAAUAAUAA AA   UAAGAUA        AAU UGUG G
GU       G      GA   U G    A   C    AU              A  UAU       UUGUUAAA   C    C
Stem-loop sequence UAAAAUCUUACAUUGUACUCAUUCACUUAAUCAACGUGUAAUUUAUUAUUAUUUUUAUUUUAUUUAAACAUACGCGUGUCUAAAAAUUGUUAUAGAAUUAUAAAAAUAAUAAAUUAUAUAUUGACUAGAUGAAGGUGUAAGGUGUAAGGAUUUUAUG