ncRNA ID | novel_jre_miR322 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443495.1:652577-652733 [-] |
Reference genome | wgs.5d |
Source | SRR1170955 |
Length | 25 |
Mature sequence(if miRNA) | 1 - AGGUGUAAGGUGUAAGGAUUUUAUG - 25 |
Stem-loop(if miRNA) |
--       -      UG   U A    C   A    CG              A  UUU       --------   A    A   UAAAAUC UUACAU  UAC C UUCA UUA UCAA  UGUAAUUUAUUAUU UU   AUUUUAU        UUA ACAU C   ||||||| ||||||  ||| | |||| ||| ||||  |||||||||||||| ||   |||||||        ||| ||||   AUUUUAG AAUGUG  AUG G AAGU GAU AGUU  AUAUUAAAUAAUAA AA   UAAGAUA        AAU UGUG G GU       G      GA   U G    A   C    AU              A  UAU       UUGUUAAA   C    C |
Stem-loop sequence | UAAAAUCUUACAUUGUACUCAUUCACUUAAUCAACGUGUAAUUUAUUAUUAUUUUUAUUUUAUUUAAACAUACGCGUGUCUAAAAAUUGUUAUAGAAUUAUAAAAAUAAUAAAUUAUAUAUUGACUAGAUGAAGGUGUAAGGUGUAAGGAUUUUAUG |