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BaseInfo

ncRNA ID	novel_jre_miR321
Species	Juglans regia
Class	miRNA
Genome position	NW_017443485.1:525790-525961 [-]
Reference genome	wgs.5d
Source	SRR1170955
Length	24
Mature sequence(if miRNA)	149 - AAUGAUAGUUACAGUCGUGAGUGC - 172
Stem-loop(if miRNA)	--    AUAGU         -     CA          AC    A            AAAAAA   CAUAAAUACAAGAUUACAAAA   AAUG     UACAGUCGU GAGUG  UAAGUAUCGU  AAUC CUUUGAAAAAGA      GUA                     A   ||||     ||||||||| |||||  ||||||||||  |||| ||||||||||||      |||   UUAC     AUGUCAGCA CUCAC  GUUCGUAGCA  UUAG GAAACUUUUUCU      AGA                     U CA    GAUAU         G     AC          CA    C            -CACUC   UGAUAAUCUAAAAAUAAAAAA
Stem-loop sequence	AAUGAUAGUUACAGUCGUGAGUGCAUAAGUAUCGUACAAUCACUUUGAAAAAGAAAAAAAGUACAUAAAUACAAGAUUACAAAAAUAAAAAAUAAAAAUCUAAUAGUAGACUCACUCUUUUUCAAAGCGAUUACACGAUGCUUGCACACUCGACGACUGUAUAUAGCAUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019004598.1	ncRNA:24   CGUGAGUGCUGACAUUGAUAGUAA   1   *|||||||*||||||||||||||| targets:1384   ACACUCACAACUGUAACUAUCAUU   1407 Target Full Sequence	1.0	PREDICTED: Juglans regia branched-chain-amino-acid aminotransferase 2, chloroplastic-like (LOC109021870), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019004597.1	ncRNA:24   CGUGAGUGCUGACAUUGAUAGUAA   1   *|||||||*||||||||||||||| targets:1503   ACACUCACAACUGUAACUAUCAUU   1526 Target Full Sequence	1.0	PREDICTED: Juglans regia branched-chain-amino-acid aminotransferase 2, chloroplastic-like (LOC109021870), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018952930.1	ncRNA:24   CGUGAGUGCUGACAUUGAUAGUAA   1   |||=|||||||||*|||||||||| targets:3297   GCAUUCACGACUGCAACUAUCAUU   3320 Target Full Sequence	1.5	PREDICTED: Juglans regia pullulanase 1, chloroplastic (LOC108981688), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018952929.1	ncRNA:24   CGUGAGUGCUGACAUUGAUAGUAA   1   |||=|||||||||*|||||||||| targets:3300   GCAUUCACGACUGCAACUAUCAUU   3323 Target Full Sequence	1.5	PREDICTED: Juglans regia pullulanase 1, chloroplastic (LOC108981688), transcript variant X1, mRNA	NA	coding protein	psRNATarget