ncRNA ID | novel_jre_miR319 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443403.1:2512-2601 [+] |
Reference genome | wgs.5d |
Source | SRR1170955;SRR1170960;SRR1168880;SRR1168883 |
Length | 24 |
Mature sequence(if miRNA) | 67 - AAUGACUAUUGUAUUGCCUUGACC - 90 |
Stem-loop(if miRNA) |
--C    A               CU               C   G    CAAG CAAUACAAUAGUCAU  UUAAGUAAUGUGGGA UUA U    |||| |||||||||||||||  ||||||||||||||| |||    GUUC GUUAUGUUAUCAGUA  AAUUCGUUACACUCU AAU A CCA    C               AG               C   G |
Stem-loop sequence | CCAAGACAAUACAAUAGUCAUCUUUAAGUAAUGUGGGACUUAGUAGUAACUCUCACAUUGCUUAAGAAUGACUAUUGUAUUGCCUUGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018972167.1 |
|
2.5 | PREDICTED: Juglans regia trihelix transcription factor GT-2-like (LOC108996329), mRNA | NA | coding protein | psRNATarget |