Search result

BaseInfo

ncRNA ID novel_jre_miR319
Species Juglans regia
Class miRNA
Genome position NW_017443403.1:2512-2601 [+]
Reference genome wgs.5d
Source SRR1170955;SRR1170960;SRR1168880;SRR1168883
Length 24
Mature sequence(if miRNA) 67 - AAUGACUAUUGUAUUGCCUUGACC - 90
Stem-loop(if miRNA) --C    A               CU               C   G
   CAAG CAAUACAAUAGUCAU  UUAAGUAAUGUGGGA UUA U
   |||| |||||||||||||||  ||||||||||||||| |||
   GUUC GUUAUGUUAUCAGUA  AAUUCGUUACACUCU AAU A
CCA    C               AG               C   G
Stem-loop sequence CCAAGACAAUACAAUAGUCAUCUUUAAGUAAUGUGGGACUUAGUAGUAACUCUCACAUUGCUUAAGAAUGACUAUUGUAUUGCCUUGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018972167.1
ncRNA:24   CCAG-----UUCCGUUAUGUUAUCAGUAA   1
  *||=-----|||||||*|||||||||||*
targets:1124   AGUUGUGGAAAGGCAAGACAAUAGUCAUG   1152

2.5 PREDICTED: Juglans regia trihelix transcription factor GT-2-like (LOC108996329), mRNA NA coding protein psRNATarget