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BaseInfo

ncRNA ID novel_jre_miR315
Species Juglans regia
Class miRNA
Genome position NW_017443266.1:502773-502859 [+]
Reference genome wgs.5d
Source SRR1170955;SRR1168883
Length 24
Mature sequence(if miRNA) 1 - AUCGAGCGAACCACUCUGGAAGGU - 24
Stem-loop(if miRNA) --A       -    AC  UG  -      C      ---    CAU
   UCGAGCG AACC  UC  GA AGGUUC GCUCGA   GCGC   G
   ||||||| ||||  ||  || |||||| ||||||   ||||
   AGCUCGC UUGG  AG  CU UCCAAG CGAGCU   CGCG   U
GCG       C    -A  GU  C      -      ACC    AGC
Stem-loop sequence AUCGAGCGAACCACUCUGGAAGGUUCCGCUCGAGCGCCAUGUCGAGCGCCCAUCGAGCGAACCUCUCUGGAAGGUUCCGCUCGAGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018977967.1
ncRNA:24   UGGA----------AGGUCUCACCAAGCGAGCUA   1
  ||||----------||=|*=||||||||||||||
targets:319   ACCUGGGAUUAAGGUCUAUGGUGGUUCGCUCGAU   352

3.0 PREDICTED: Juglans regia hydroxyacylglutathione hydrolase cytoplasmic (LOC109000916), mRNA NA coding protein psRNATarget