ncRNA ID | novel_jre_miR315 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443266.1:502773-502859 [+] |
Reference genome | wgs.5d |
Source | SRR1170955;SRR1168883 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCGAGCGAACCACUCUGGAAGGU - 24 |
Stem-loop(if miRNA) |
--A       -    AC  UG  -      C      ---    CAU    UCGAGCG AACC  UC  GA AGGUUC GCUCGA   GCGC   G    ||||||| ||||  ||  || |||||| ||||||   ||||    AGCUCGC UUGG  AG  CU UCCAAG CGAGCU   CGCG   U GCG       C    -A  GU  C      -      ACC    AGC |
Stem-loop sequence | AUCGAGCGAACCACUCUGGAAGGUUCCGCUCGAGCGCCAUGUCGAGCGCCCAUCGAGCGAACCUCUCUGGAAGGUUCCGCUCGAGCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018977967.1 |
|
3.0 | PREDICTED: Juglans regia hydroxyacylglutathione hydrolase cytoplasmic (LOC109000916), mRNA | NA | coding protein | psRNATarget |