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BaseInfo

ncRNA ID novel_jre_miR310
Species Juglans regia
Class miRNA
Genome position NW_017443236.1:17174-17265 [+]
Reference genome wgs.5d
Source SRR1170955;SRR1170966
Length 24
Mature sequence(if miRNA) 69 - AUGACUAUUGUAUUGCAUUGGCCU - 92
Stem-loop(if miRNA) --     GGA               A                AUAG
  GCCAA   AAUACAAUAGUCAUC UUAAGCAAUGUGGGAC    U
  |||||   ||||||||||||||| ||||||||||||||||
  CGGUU   UUAUGUUAUCAGUAG AAUUCGUUACACUCUG    A
UC     ACG               G                AAUG
Stem-loop sequence GCCAAGGAAAUACAAUAGUCAUCAUUAAGCAAUGUGGGACAUAGUAGUAAGUCUCACAUUGCUUAAGGAUGACUAUUGUAUUGCAUUGGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018954482.1
ncRNA:24   UCCGGUUACGUUAUGUUAUCAGUA   1
  |**|||||||||||||||||*||*
targets:791   AUACCAAUGCAAUACAAUAGGCAG   814

2.5 PREDICTED: Juglans regia 2-oxoglutarate dehydrogenase, mitochondrial-like (LOC108982983), transcript variant X3, mRNA NA coding protein psRNATarget
XM_018954481.1
ncRNA:24   UCCGGUUACGUUAUGUUAUCAGUA   1
  |**|||||||||||||||||*||*
targets:916   AUACCAAUGCAAUACAAUAGGCAG   939

2.5 PREDICTED: Juglans regia 2-oxoglutarate dehydrogenase, mitochondrial-like (LOC108982983), transcript variant X2, mRNA NA coding protein psRNATarget
XM_018954480.1
ncRNA:24   UCCGGUUACGUUAUGUUAUCAGUA   1
  |**|||||||||||||||||*||*
targets:932   AUACCAAUGCAAUACAAUAGGCAG   955

2.5 PREDICTED: Juglans regia 2-oxoglutarate dehydrogenase, mitochondrial-like (LOC108982983), transcript variant X1, mRNA NA coding protein psRNATarget