ncRNA ID | novel_jre_miR310 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443236.1:17174-17265 [+] |
Reference genome | wgs.5d |
Source | SRR1170955;SRR1170966 |
Length | 24 |
Mature sequence(if miRNA) | 69 - AUGACUAUUGUAUUGCAUUGGCCU - 92 |
Stem-loop(if miRNA) |
--     GGA               A                AUAG   GCCAA   AAUACAAUAGUCAUC UUAAGCAAUGUGGGAC    U   |||||   ||||||||||||||| ||||||||||||||||   CGGUU   UUAUGUUAUCAGUAG AAUUCGUUACACUCUG    A UC     ACG               G                AAUG |
Stem-loop sequence | GCCAAGGAAAUACAAUAGUCAUCAUUAAGCAAUGUGGGACAUAGUAGUAAGUCUCACAUUGCUUAAGGAUGACUAUUGUAUUGCAUUGGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018954482.1 |
|
2.5 | PREDICTED: Juglans regia 2-oxoglutarate dehydrogenase, mitochondrial-like (LOC108982983), transcript variant X3, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018954481.1 |
|
2.5 | PREDICTED: Juglans regia 2-oxoglutarate dehydrogenase, mitochondrial-like (LOC108982983), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018954480.1 |
|
2.5 | PREDICTED: Juglans regia 2-oxoglutarate dehydrogenase, mitochondrial-like (LOC108982983), transcript variant X1, mRNA | NA | coding protein | psRNATarget |