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BaseInfo

ncRNA ID	novel_jre_miR306
Species	Juglans regia
Class	miRNA
Genome position	NW_017443109.1:646037-646125 [-]
Reference genome	wgs.5d
Source	SRR1170955;SRR1170958;SRR1170961;SRR1170962;SRR1170964;SRR1170965;SRR1170966;SRR1168883;SRR1168884
Length	21
Mature sequence(if miRNA)	1 - CUGAAGUGUUUGGAGGAACUC - 21
Stem-loop(if miRNA)	--       UG         --CUAU     AUAGACUCUCUUCA   GUUCCUC  AAUACUUCA      GGAGU              A   |||||||  |||||||||      |||||              A   CAAGGAG  UUGUGAAGU      UUCUG              C CU       GU         CAUCCU     UUGUACGGAAUAUU
Stem-loop sequence	GUUCCUCUGAAUACUUCACUAUGGAGUAUAGACUCUCUUCAAACUUAUAAGGCAUGUUGUCUUUCCUACUGAAGUGUUUGGAGGAACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018995278.1	ncRNA:21   CUCAAGGAGGUUUGUGAAGUC   1   **|||||*||||||||||||* targets:43   ACGUUCCCCCAAACACUUCAA   63 Target Full Sequence	2.0	PREDICTED: Juglans regia sulfate transporter 2.1 (LOC109013249), mRNA	NA	coding protein	psRNATarget
XM_018963098.1	ncRNA:21   CUCAAGGAGGUUUGUGAAGUC   1   ||||||||||||||=|||||* targets:414   GAGUUCCUCCAAACGCUUCAU   434 Target Full Sequence	2.5	PREDICTED: Juglans regia ATP sulfurylase 1, chloroplastic-like (LOC108989481), mRNA	NA	coding protein	psRNATarget
XM_018983884.1	ncRNA:21   CUCAAGGAGGUUUGUGAAGUC   1   ||||||||||||||*|||||* targets:334   GAGUUCCUCCAAACUCUUCAU   354 Target Full Sequence	2.5	PREDICTED: Juglans regia ATP sulfurylase 1, chloroplastic (LOC109005096), mRNA	NA	coding protein	psRNATarget
XM_018991092.1	ncRNA:21   CUCAAGGAGGUUUGUGAAGUC   1   |=||||=|||||||*|||||| targets:1128   GGGUUCUUCCAAACCCUUCAG   1148 Target Full Sequence	2.5	PREDICTED: Juglans regia protein MIZU-KUSSEI 1-like (LOC109010308), mRNA	NA	coding protein	psRNATarget
XM_018986032.1	ncRNA:21   CUCAAGGAGGUUUGUGAAGUC   1   *||*|||||||||*||||||| targets:419   AAGCUCCUCCAAAGACUUCAG   439 Target Full Sequence	2.5	PREDICTED: Juglans regia cysteine protease XCP1-like (LOC109006670), mRNA	NA	coding protein	psRNATarget
XM_018973401.1	ncRNA:21   CUCAAGGAGGUUUGUGAAGUC   1   ||||||**||||||||||||* targets:67   GAGUUCACCCAAACACUUCAA   87 Target Full Sequence	3.0	PREDICTED: Juglans regia low affinity sulfate transporter 3 (LOC108997223), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018973400.1	ncRNA:21   CUCAAGGAGGUUUGUGAAGUC   1   ||||||**||||||||||||* targets:66   GAGUUCACCCAAACACUUCAA   86 Target Full Sequence	3.0	PREDICTED: Juglans regia low affinity sulfate transporter 3 (LOC108997223), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018995278.1	ncRNA:21   CUCAAGGAGGUUUGUGAAGUC   1   **||||=*||||||||||||* targets:106   UUGUUCUCCCAAACACUUCAA   126 Target Full Sequence	3.0	PREDICTED: Juglans regia sulfate transporter 2.1 (LOC109013249), mRNA	NA	coding protein	psRNATarget