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BaseInfo

ncRNA ID novel_jre_miR305
Species Juglans regia
Class miRNA
Genome position NW_017443031.1:657960-658030 [-]
Reference genome wgs.5d
Source SRR1170955;SRR1168881
Length 24
Mature sequence(if miRNA) 1 - AACCGGAAAUGUGGGACUUGAGCC - 24
Stem-loop(if miRNA) ------UU     CUGCCAUUGGGGUUUUACAAAUGG
        UGGGC                        U
        |||||                        A
        AGGGU                        U
CCGAGUUC     GUAAAGGCCAACCCUAUCCGAGAC
Stem-loop sequence UUUGGGCCUGCCAUUGGGGUUUUACAAAUGGUAUCAGAGCCUAUCCCAACCGGAAAUGUGGGACUUGAGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018980430.1
ncRNA:24   CCGAGUUCAGGGUGUAAAGGCCAA   1
  |||||||||||||||||||=||||
targets:1160   GGCUCAAGUCCCACAUUUCUGGUU   1183

1.5 PREDICTED: Juglans regia cullin-3A-like (LOC109002603), transcript variant X2, mRNA NA coding protein psRNATarget