ncRNA ID | novel_jre_miR303 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017442939.1:24848-24979 [+] |
Reference genome | wgs.5d |
Source | SRR1170955 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUAGACAAGCUCCAUACAAGCCU - 24 |
Stem-loop(if miRNA) |
--             C  A         U        A    UC     AAUAACAAAUAGUUUUU   AAUAGACAAGCUC AU CAAGCCUUU GUAAAAAA UGGG  CCACU                 U   ||||||||||||| || ||||||||| |||||||| ||||  |||||                 U   UUAUCUGUUCGAG UA GUUCGGGAA CAUUUUUU ACCU  GGUGG                 U GU             A  C         -        C    GA     AAUUUUUCACAUUUUUU |
Stem-loop sequence | AAUAGACAAGCUCCAUACAAGCCUUUUGUAAAAAAAUGGGUCCCACUAAUAACAAAUAGUUUUUUUUUUUUUUACACUUUUUAAGGUGGAGUCCACUUUUUUACAAGGGCUUGCAUAGAGCUUGUCUAUUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018953600.1 |
|
1.5 | PREDICTED: Juglans regia two-component response regulator ORR23-like (LOC108982277), mRNA | NA | coding protein | psRNATarget |