Search result

BaseInfo

ncRNA ID novel_jre_miR303
Species Juglans regia
Class miRNA
Genome position NW_017442939.1:24848-24979 [+]
Reference genome wgs.5d
Source SRR1170955
Length 24
Mature sequence(if miRNA) 1 - AAUAGACAAGCUCCAUACAAGCCU - 24
Stem-loop(if miRNA) --             C  A         U        A    UC     AAUAACAAAUAGUUUUU
  AAUAGACAAGCUC AU CAAGCCUUU GUAAAAAA UGGG  CCACU                 U
  ||||||||||||| || ||||||||| |||||||| ||||  |||||                 U
  UUAUCUGUUCGAG UA GUUCGGGAA CAUUUUUU ACCU  GGUGG                 U
GU             A  C         -        C    GA     AAUUUUUCACAUUUUUU
Stem-loop sequence AAUAGACAAGCUCCAUACAAGCCUUUUGUAAAAAAAUGGGUCCCACUAAUAACAAAUAGUUUUUUUUUUUUUUACACUUUUUAAGGUGGAGUCCACUUUUUUACAAGGGCUUGCAUAGAGCUUGUCUAUUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018953600.1
ncRNA:24   UCCGAACAUACCUCGAACAGAUAA   1
  |*|||||||||*||||||||||||
targets:63   AAGCUUGUAUGAAGCUUGUCUAUU   86

1.5 PREDICTED: Juglans regia two-component response regulator ORR23-like (LOC108982277), mRNA NA coding protein psRNATarget