ncRNA ID | novel_jre_miR302 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017442867.1:346138-346328 [+] |
Reference genome | wgs.5d |
Source | SRR1170955;SRR1170960;SRR1170961;SRR1170962;SRR1168880;SRR1170966;SRR1170967;SRR1170968;SRR1170969;SRR1170970;SRR1168881;SRR1168883 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGUAGGACUUGGCACUUAAUGC - 24 |
Stem-loop(if miRNA) |
--     AG                     G       G           CUU    UCAUU    A       AAC  U    AUAGCGA  C      AU   AAUGU  GACUUGGCACUUAAUGCAUCU UAUCAUG UUUAUUCACUU   UCAU     CUUC UCCACUC   AU GGAC       GG GUUGUA  U   |||||  ||||||||||||||||||||| ||||||| |||||||||||   ||||     |||| |||||||   || ||||       || ||||||  A   UUACA  CUGAAUUGUGAGUUACGUGGA AUAGUAC GAGUAAGUGGA   AGUA     GAAG AGGUGGG   UA CCUG       CC CGACAU  U GG     CU                     A       -           --U    ----U    A       CUA  C    ------A  -      GU |
Stem-loop sequence | AAUGUAGGACUUGGCACUUAAUGCAUCUGUAUCAUGGUUUAUUCACUUCUUUCAUUCAUUCUUCAUCCACUCAACAUUGGACAUAGCGAGGCGUUGUAAUUAUUGUACAGCCCAGUCCCAUAUCGGGUGGAAGAAGUAUGAUAGGUGAAUGAGCAUGAUAAAGGUGCAUUGAGUGUUAAGUCUCACAUUGG |