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BaseInfo

ncRNA ID novel_jre_miR284
Species Juglans regia
Class miRNA
Genome position NW_017440545.1:13142-13228 [-]
Reference genome wgs.5d
Source SRR1170955
Length 24
Mature sequence(if miRNA) 64 - AUCGAGCGAACCACUCUGGAAGGU - 87
Stem-loop(if miRNA) --A       -    AC      -      U      ---     AC
   UCGAGCG AACC  UCUGGA AGGUUC GCUCGA   GCGCU  G
   ||||||| ||||  |||||| |||||| ||||||   |||||
   AGCUCGC UUGG  AGAUCU UCCAAG CGAGCU   CGCGA  U
GCG       C    -A      C      -      ACC     GC
Stem-loop sequence AUCGAGCGAACCACUCUGGAAGGUUCUGCUCGAGCGCUACGUCGAGCGCCCAUCGAGCGAACCUCUCUAGAAGGUUCCGCUCGAGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018977967.1
ncRNA:24   UGGA----------AGGUCUCACCAAGCGAGCUA   1
  ||||----------||=|*=||||||||||||||
targets:319   ACCUGGGAUUAAGGUCUAUGGUGGUUCGCUCGAU   352

3.0 PREDICTED: Juglans regia hydroxyacylglutathione hydrolase cytoplasmic (LOC109000916), mRNA NA coding protein psRNATarget