| ncRNA ID | novel_jre_miR279 |
| Species | Juglans regia |
| Class | miRNA |
| Genome position | NW_017439527.1:12605-12790 [-] |
| Reference genome | wgs.5d |
| Source | SRR1170955 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - GAAAUGUGGGACUUGAGCUAUGCC - 24 |
| Stem-loop(if miRNA) |
-----U A A GC AAA GAAG -- C A G UC -- UC CAUUGA ---G C GU UGAG UCCUACAUU UUGG GGA UUCU UGCU UUU UAA GU CAAUGGA GCU AAUUGCAU CUA UC U || |||| ||||||||| |||| ||| |||| |||| ||| ||| || ||||||| ||| |||||||| ||| || U CG GUUC AGGGUGUAA GACC CCU GAGA AUGA AAA AUU CG GUUAUCU UGG UUGAUGUA GAU AG U CCGUAU A - -A AAC AUCA CU U C G GA UC GU ---CCG AUGA U |
| Stem-loop sequence | UGUAUGAGAUCCUACAUUGCUUGGAAAGGAGAAGUUCUUGCUCUUUAUAAGGUUCCAAUGGAGCUUCAAUUGCAUCAUUGACUAGUCCUUUUGAAGUAUAGGCCAUGUAGUUUGGGUCUUCUAUUGAGGCGUUACAAAUAGUAUCAGAGACUAUCCCAACCAGAAAUGUGGGACUUGAGCUAUGCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_018980430.1 |
|
1.0 | PREDICTED: Juglans regia cullin-3A-like (LOC109002603), transcript variant X2, mRNA | NA | coding protein | psRNATarget |