Search result

BaseInfo

ncRNA ID novel_jre_miR273
Species Juglans regia
Class miRNA
Genome position NW_017438046.1:6746-6897 [-]
Reference genome wgs.5d
Source SRR1170955;SRR1170960
Length 24
Mature sequence(if miRNA) 1 - CAAACGAGGUCAAGCAUAAAAGAG - 24
Stem-loop(if miRNA) --CA      UC   A  UA                   A    C       -------------A        C     A C
    UUUAUG  UGA CU  UUUGUUAUCAUCAAAAUCC UAUG AGAUAUA              AUAUGAUG UUGAA C U
    ||||||  ||| ||  ||||||||||||||||||| |||| |||||||              |||||||| ||||| |
    AAAUAC  ACU GA  AAACAAUAGUAGUUUUAGG AUGC UUUAUAU              UAUACUAC AACUU G U
GAGA      GA   G  GC                   A    A       CUCAAUUAUUUCAA        -     G G
Stem-loop sequence CAUUUAUGUCUGAACUUAUUUGUUAUCAUCAAAAUCCAUAUGCAGAUAUAAAUAUGAUGCUUGAAACCUUGGGUUCAACAUCAUAUAACUUUAUUAACUCUAUAUUUACGUAAGGAUUUUGAUGAUAACAAACGAGGUCAAGCAUAAAAGAG