ncRNA ID | novel_jre_miR273 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017438046.1:6746-6897 [-] |
Reference genome | wgs.5d |
Source | SRR1170955;SRR1170960 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CAAACGAGGUCAAGCAUAAAAGAG - 24 |
Stem-loop(if miRNA) |
--CA      UC   A  UA                   A    C       -------------A        C     A C     UUUAUG  UGA CU  UUUGUUAUCAUCAAAAUCC UAUG AGAUAUA              AUAUGAUG UUGAA C U     ||||||  ||| ||  ||||||||||||||||||| |||| |||||||              |||||||| ||||| |     AAAUAC  ACU GA  AAACAAUAGUAGUUUUAGG AUGC UUUAUAU              UAUACUAC AACUU G U GAGA      GA   G  GC                   A    A       CUCAAUUAUUUCAA        -     G G |
Stem-loop sequence | CAUUUAUGUCUGAACUUAUUUGUUAUCAUCAAAAUCCAUAUGCAGAUAUAAAUAUGAUGCUUGAAACCUUGGGUUCAACAUCAUAUAACUUUAUUAACUCUAUAUUUACGUAAGGAUUUUGAUGAUAACAAACGAGGUCAAGCAUAAAAGAG |