ncRNA ID | novel_jre_miR269 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017436268.1:133424-133510 [+] |
Reference genome | wgs.5d |
Source | SRR1170955;SRR1170965;SRR1168883 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCGAGCGAACCACUCUGGAAGGU - 24 |
Stem-loop(if miRNA) |
--A       -    AC  UG  -      C      ---     AC    UCGAGCG AACC  UC  GA AGGUUC GCUUGA   GCGCU  G    ||||||| ||||  ||  || |||||| ||||||   |||||    AGCUCGC UUGG  AG  CU UCCAAG CGAGCU   CGCGA  U GUG       C    -A  GU  C      -      ACC     GC |
Stem-loop sequence | AUCGAGCGAACCACUCUGGAAGGUUCCGCUUGAGCGCUACGUCGAGCGCCCAUCGAGCGAACCUCUCUGGAAGGUUCCGCUCGAGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018977967.1 |
|
3.0 | PREDICTED: Juglans regia hydroxyacylglutathione hydrolase cytoplasmic (LOC109000916), mRNA | NA | coding protein | psRNATarget |