ncRNA ID | novel_jre_miR268 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017436172.1:16025-16127 [+] |
Reference genome | wgs.5d |
Source | SRR1170955;SRR1170958;SRR1170965;SRR1170966;SRR1170970;SRR1168883;SRR1168884 |
Length | 24 |
Mature sequence(if miRNA) | 80 - CAUGUUGAUGGUAUGUGGUGUAGG - 103 |
Stem-loop(if miRNA) |
--         C      C     A    -   CA    U  GAU    AUU   UACACUACA ACCAUC ACAUG CAUA UUU  UUUG AA   UCAA   U   ||||||||| |||||| ||||| |||| |||  |||| ||   ||||   U   AUGUGGUGU UGGUAG UGUAC GUAU AAA  AAAC UU   AGUU   A GG         A      U     C    U   UC    C  -AU    AAA |
Stem-loop sequence | UACACUACACACCAUCCACAUGACAUAUUUCAUUUGUAAGAUUCAAAUUUUAAAAUUGAUAUUCCAAACUAAAUUAUGCCAUGUUGAUGGUAUGUGGUGUAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018968245.1 |
|
3.0 | PREDICTED: Juglans regia uncharacterized LOC108993358 (LOC108993358), mRNA | NA | coding protein | psRNATarget |