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BaseInfo

ncRNA ID	novel_jre_miR266
Species	Juglans regia
Class	miRNA
Genome position	NW_017442452.1:42840-42944 [+]
Reference genome	wgs.5d
Source	SRR1168796
Length	23
Mature sequence(if miRNA)	83 - UUUUCAAAGCGACUGUAUGACGU - 105
Stem-loop(if miRNA)	--AC                    -   GAAUAAAUA   A     -         AA     CGUGCAGUCGCUUUGAAAAA AGU         GGA UCCAC AUUAAAAGA  U     |||||||||||||||||||| |||         ||| ||||| |||||||||     GUAUGUCAGCGAAACUUUUU UCA         CCU AGGUG UAAUUUUUU  U UGCA                    C   ---------   C     A         AA
Stem-loop sequence	ACCGUGCAGUCGCUUUGAAAAAAGUGAAUAAAUAGGAAUCCACAUUAAAAGAAAUUAAUUUUUUAAUAGUGGACUCCACUCUUUUUCAAAGCGACUGUAUGACGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019004598.1	ncRNA:23   UGCAGUAUGUCAGCGAAACUUUU   1   =||||||=||||||||||||||| targets:1274   GCGUCAUGCAGUCGCUUUGAAAA   1296 Target Full Sequence	1.0	PREDICTED: Juglans regia branched-chain-amino-acid aminotransferase 2, chloroplastic-like (LOC109021870), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019004597.1	ncRNA:23   UGCAGUAUGUCAGCGAAACUUUU   1   =||||||=||||||||||||||| targets:1393   GCGUCAUGCAGUCGCUUUGAAAA   1415 Target Full Sequence	1.0	PREDICTED: Juglans regia branched-chain-amino-acid aminotransferase 2, chloroplastic-like (LOC109021870), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018970092.1	ncRNA:23   UGCAGUAUGUCAGCGAAACUUUU   1   |||*|*|=||||||||||||||| targets:3747   ACGCCUUGCAGUCGCUUUGAAAA   3769 Target Full Sequence	2.0	PREDICTED: Juglans regia translation initiation factor eIF-2B subunit epsilon (LOC108994766), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_018987331.1	ncRNA:23   UGCAGUAUGUCAGCGAAACUUUU   1   =||||||=|||*||||||||||| targets:2040   GCGUCAUGCAGCCGCUUUGAAAA   2062 Target Full Sequence	2.5	PREDICTED: Juglans regia CLP protease regulatory subunit CLPX1, mitochondrial (LOC109007583), mRNA	NA	coding protein	psRNATarget
XM_018992483.1	ncRNA:23   UGCAGUAUGUCAGCGAAACUUUU   1   =||||*|==|||||||||||||| targets:2413   GCGUCUUGUAGUCGCUUUGAAAA   2435 Target Full Sequence	3.0	PREDICTED: Juglans regia elongation factor G-2, chloroplastic (LOC109011319), transcript variant X3, mRNA	NA	coding protein	psRNATarget