ncRNA ID | novel_jre_miR264 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017408349.1:782-944 [-] |
Reference genome | wgs.5d |
Source | SRR1170955;SRR1170957;SRR1170965 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CAUUCCACGAUUGUAUGUAGCAUU - 24 |
Stem-loop(if miRNA) |
--  A   U          -           GU      A             --AAUGAAUAAAUA  AGACUCACAUUAAA   UG UAU UGCAGUUGUG AGUGUGUAAAU  CGUACA UCGUUUUGAAAAA              UG              A   || ||| |||||||||| |||||||||||  |||||| |||||||||||||              ||   AC AUG AUGUUAGCAC UUACGCAUUUA  GCAUGU AGCAAAACUUUUU              UA              G UU  G   U          C           UG      C             CUCACCCUAGAUAA  AUUUUUUAAUUAAA |
Stem-loop sequence | UGAUAUUUGCAGUUGUGAGUGUGUAAAUGUCGUACAAUCGUUUUGAAAAAAAUGAAUAAAUAUGAGACUCACAUUAAAAGAAAUUAAUUUUUUAAUAAUAGAUCCCACUCUUUUUCAAAACGACUGUACGGUAUUUACGCAUUCCACGAUUGUAUGUAGCAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018970092.1 |
|
2.5 | PREDICTED: Juglans regia translation initiation factor eIF-2B subunit epsilon (LOC108994766), transcript variant X6, mRNA | NA | coding protein | psRNATarget |