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BaseInfo

ncRNA ID novel_jre_miR260
Species Juglans regia
Class miRNA
Genome position NW_017395360.1:1560-1782 [+]
Reference genome wgs.5d
Source SRR1170955
Length 24
Mature sequence(if miRNA) 200 - AGUGGGUGUGCAGGAUGUGAGGCU - 223
Stem-loop(if miRNA) --       C                                          C                  -    UCU      AAACCC  UAUCCUGCACACCCACUUA
  UCUCACA CUUGCACACCCACUUAAAAACAUGUGAUUUUAUUUUUUUAUC UCAUAUUUCAUAUUGAAU UAAU   AAAUAU      CA                   A
  ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||   ||||||      ||                   A
  GGAGUGU GGACGUGUGGGUGAAUUUUUGUACACUAAAAUAAAAAAAUAG AGUAUAAAGUAUAACUUA GUUA   UUUAUA      AU                   A
UC       A                                          A                  A    UAC      -CUCCU  UUUUUUAUUUUAGUGUACA
Stem-loop sequence UCUCACACCUUGCACACCCACUUAAAAACAUGUGAUUUUAUUUUUUUAUCCUCAUAUUUCAUAUUGAAUUAAUUCUAAAUAUAAACCCCAUAUCCUGCACACCCACUUAAAAACAUGUGAUUUUAUUUUUUUAUCCUCAUAUUUCAUAUUGAAUUCAAUAUGAAAUAUGAAGAUAAAAAAAUAAAAUCACAUGUUUUUAAGUGGGUGUGCAGGAUGUGAGGCU