ncRNA ID | novel_jre_miR260 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017395360.1:1560-1782 [+] |
Reference genome | wgs.5d |
Source | SRR1170955 |
Length | 24 |
Mature sequence(if miRNA) | 200 - AGUGGGUGUGCAGGAUGUGAGGCU - 223 |
Stem-loop(if miRNA) |
--       C                                          C                  -    UCU      AAACCC  UAUCCUGCACACCCACUUA   UCUCACA CUUGCACACCCACUUAAAAACAUGUGAUUUUAUUUUUUUAUC UCAUAUUUCAUAUUGAAU UAAU   AAAUAU      CA                   A   ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||   ||||||      ||                   A   GGAGUGU GGACGUGUGGGUGAAUUUUUGUACACUAAAAUAAAAAAAUAG AGUAUAAAGUAUAACUUA GUUA   UUUAUA      AU                   A UC       A                                          A                  A    UAC      -CUCCU  UUUUUUAUUUUAGUGUACA |
Stem-loop sequence | UCUCACACCUUGCACACCCACUUAAAAACAUGUGAUUUUAUUUUUUUAUCCUCAUAUUUCAUAUUGAAUUAAUUCUAAAUAUAAACCCCAUAUCCUGCACACCCACUUAAAAACAUGUGAUUUUAUUUUUUUAUCCUCAUAUUUCAUAUUGAAUUCAAUAUGAAAUAUGAAGAUAAAAAAAUAAAAUCACAUGUUUUUAAGUGGGUGUGCAGGAUGUGAGGCU |