ncRNA ID | novel_jre_miR259 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017394992.1:419-505 [-] |
Reference genome | wgs.5d |
Source | SRR1170955 |
Length | 24 |
Mature sequence(if miRNA) | 64 - AUCGAGCGAACCACUCUGGAAGGU - 87 |
Stem-loop(if miRNA) |
--A         -  AC  UG  -      C      ---     AC    UCGAGCGAA CC  UC  GA AGGUUC GCUCGA   GCGCU  G    ||||||||| ||  ||  || |||||| ||||||   |||||    AGCUCGCUU GG  AG  CU UCCAAG CGAGCU   CGCGA  U GCG         U  -A  GU  C      -      ACC     GC |
Stem-loop sequence | AUCGAGCGAACCACUCUGGAAGGUUCCGCUCGAGCGCUACGUCGAGCGCCCAUCGAGCGAACCUCUCUGGAAGGUUUCGCUCGAGCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018977967.1 |
|
3.0 | PREDICTED: Juglans regia hydroxyacylglutathione hydrolase cytoplasmic (LOC109000916), mRNA | NA | coding protein | psRNATarget |