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BaseInfo

ncRNA ID	novel_jre_miR256
Species	Juglans regia
Class	miRNA
Genome position	NW_017389954.1:1069870-1069979 [-]
Reference genome	wgs.5d
Source	SRR1170955;SRR1170965
Length	24
Mature sequence(if miRNA)	1 - UUUCAAAGCGACUGCACGACACUU - 24
Stem-loop(if miRNA)	--A    AUA                GAG     UCCACUCAAAAAAAAUUAAUUU    UGUC   CAGUCGUUUUGAAAAA   UUGAG                      C    ||||   ||||||||||||||||   |||||    ACAG   GUCAGCGAAACUUUUU   CAUUU                      U UUC    CAC                --U     AUUUAUACUAUAGGUGUACUUU
Stem-loop sequence	AUGUCAUACAGUCGUUUUGAAAAAGAGUUGAGUCCACUCAAAAAAAAUUAAUUUCUUUUCAUGUGGAUAUCAUAUUUAUUUACUUUUUUCAAAGCGACUGCACGACACUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019004598.1	ncRNA:24   UUCACAGCACGUCAGCGAAACUUU   1   |||*|||*|||||||||||||||| targets:1272   AAGCGUCAUGCAGUCGCUUUGAAA   1295 Target Full Sequence	1.0	PREDICTED: Juglans regia branched-chain-amino-acid aminotransferase 2, chloroplastic-like (LOC109021870), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018980788.1	ncRNA:24   UUCACAGCACGUCAGCGAAACUUU   1   |||*|*|||||||||||||||||| targets:1608   AAGCGCCGUGCAGUCGCUUUGAAA   1631 Target Full Sequence	1.0	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_019004597.1	ncRNA:24   UUCACAGCACGUCAGCGAAACUUU   1   |||*|||*|||||||||||||||| targets:1391   AAGCGUCAUGCAGUCGCUUUGAAA   1414 Target Full Sequence	1.0	PREDICTED: Juglans regia branched-chain-amino-acid aminotransferase 2, chloroplastic-like (LOC109021870), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018992483.1	ncRNA:24   UUCACAGCACGUCAGCGAAACUUU   1   |||*|||*||=||||||||||||| targets:2411   AAGCGUCUUGUAGUCGCUUUGAAA   2434 Target Full Sequence	2.0	PREDICTED: Juglans regia elongation factor G-2, chloroplastic (LOC109011319), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018994468.1	ncRNA:24   UUCACAGCACGUCAGCGAAACUUU   1   ||||**|||||||||*|||||||| targets:1452   AAGUACCGUGCAGUCACUUUGAAA   1475 Target Full Sequence	2.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase PP1-like (LOC109012694), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_018987331.1	ncRNA:24   UUCACAGCACGUCAGCGAAACUUU   1   |||*|||*|||||*|||||||||| targets:2038   AAGCGUCAUGCAGCCGCUUUGAAA   2061 Target Full Sequence	2.5	PREDICTED: Juglans regia CLP protease regulatory subunit CLPX1, mitochondrial (LOC109007583), mRNA	NA	coding protein	psRNATarget