| ncRNA ID | novel_jre_miR253 |
| Species | Juglans regia |
| Class | miRNA |
| Genome position | NW_017389860.1:2021786-2021971 [-] |
| Reference genome | wgs.5d |
| Source | SRR1170955;SRR1170962 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - GAAAUGUGGGACUUGAGCUAUGCC - 24 |
| Stem-loop(if miRNA) |
-----U A A ---GU AUG AAG -- C A G -- C UUGU - -A --G U GU UAGG UCCCACAUU UUGGGA AG UUCU UGCU UUU UAA GUUCUAGUGG GG UCCAA AUCAU UG CUA UCC U || |||| ||||||||| |||||| || |||| |||| ||| ||| |||||||||| || ||||| ||||| || ||| ||| CG GUUC AGGGUGUAA AACCCU UC GAGA AUGG AAA AUU CGGGGUUAUC CC AGGUU UGGUG AC GAU AGG U CCGUAU A - AGACC --A --A CU U C G UU - ---- U CG AUG U |
| Stem-loop sequence | UGUAUAGGAUCCCACAUUGUUUGGGAAUGAGAAGUUCUUGCUCUUUAUAAGGUUCUAGUGGGGCUCCAAUUGUAUCAUUGACUAGUCCUUUUGGAGUAUAGGCCAUGUGGUUUGGACCUUCUAUUGGGGCGUUACAAAUGGUAUCAGAGACUAUCCCAACCAGAAAUGUGGGACUUGAGCUAUGCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_018980430.1 |
|
1.0 | PREDICTED: Juglans regia cullin-3A-like (LOC109002603), transcript variant X2, mRNA | NA | coding protein | psRNATarget |