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BaseInfo

ncRNA ID	novel_jre_miR248
Species	Juglans regia
Class	miRNA
Genome position	NW_017441599.1:79436-79519 [-]
Reference genome	wgs.5d
Source	SRR1168796;SRR1170956;SRR1170957;SRR1170960
Length	21
Mature sequence(if miRNA)	64 - UGCCUGGCUCCCUGAAUGCCA - 84
Stem-loop(if miRNA)	--   C         GA      UC  A    C       AG   UGC UGGCUCCCU  AUGCCA  UA GAAG UUGUCAA  A   ||| |||||||||  ||||||  || |||| |||||||   ACG ACUGAGGGG  UACGGU  AU CUUC AACGGUU  G GG   U         AG      UC  C    C       GU
Stem-loop sequence	UGCCUGGCUCCCUGAAUGCCAUCUAAGAAGCUUGUCAAAGAGUGUUGGCAACCUUCCUACUUGGCAUGAGGGGAGUCAUGCAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018994084.1	ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1   ||||||*|||||||||||||| targets:1558   UGGCAUGCAGGGAGCCAGGCA   1578 Target Full Sequence	1.0	PREDICTED: Juglans regia auxin response factor 17-like (LOC109012447), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018994083.1	ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1   ||||||*|||||||||||||| targets:1554   UGGCAUGCAGGGAGCCAGGCA   1574 Target Full Sequence	1.0	PREDICTED: Juglans regia auxin response factor 17-like (LOC109012447), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018956685.1	ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1   ||||||*|||||||||||||| targets:1685   UGGCAUGCAGGGAGCCAGGCA   1705 Target Full Sequence	1.0	PREDICTED: Juglans regia auxin response factor 17-like (LOC108984657), mRNA	NA	coding protein	psRNATarget
XM_018982821.1	ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1   ||||||*|||||||||||||| targets:2202   UGGCAUGCAGGGAGCCAGGCA   2222 Target Full Sequence	1.0	PREDICTED: Juglans regia auxin response factor 18-like (LOC109004303), mRNA	NA	coding protein	psRNATarget
XM_018982820.1	ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1   ||||||*|||||||||||||| targets:2308   UGGCAUGCAGGGAGCCAGGCA   2328 Target Full Sequence	1.0	PREDICTED: Juglans regia auxin response factor 18-like (LOC109004302), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018982819.1	ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1   ||||||*|||||||||||||| targets:2418   UGGCAUGCAGGGAGCCAGGCA   2438 Target Full Sequence	1.0	PREDICTED: Juglans regia auxin response factor 18-like (LOC109004302), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018963980.1	ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1   *|||||*|||||||||||||| targets:2103   AGGCAUACAGGGAGCCAGGCA   2123 Target Full Sequence	1.0	PREDICTED: Juglans regia auxin response factor 18-like (LOC108990113), mRNA	NA	coding protein	psRNATarget
XM_018952835.1	ncRNA:21   ACCGUAAGUCCCUCGGUCCGU   1   *|||||*|||||||||||||| targets:2350   AGGCAUACAGGGAGCCAGGCA   2370 Target Full Sequence	1.0	PREDICTED: Juglans regia auxin response factor 18-like (LOC108981601), mRNA	NA	coding protein	psRNATarget