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BaseInfo

ncRNA ID novel_jre_miR246
Species Juglans regia
Class miRNA
Genome position NW_017389739.1:342137-342283 [+]
Reference genome wgs.5d
Source SRR1170955
Length 24
Mature sequence(if miRNA) 1 - AAGACUUAGACCUGCACUCCAUUG - 24
Stem-loop(if miRNA) --        GA    C     ---AU   -        ----U     -- C UCAAGUUAGCCUGCCCCUUUUUGGUU
  AAGACUUA  CCUG ACUCC     UGG GGAGGGGU     GGGCU  A C                          C
  ||||||||  |||| |||||     ||| ||||||||     |||||  | |
  UUUUGAAU  GGAC UGAGG     GCC CUUUCUCG     CGGGG  A C                          C
CU        -A    -     AUAGU   A        UCUGA     UU - CAUCGGACUUCUUCAAUGGAGUAAAC
Stem-loop sequence AAGACUUAGACCUGCACUCCAUUGGGGAGGGGUUGGGCUACCUCAAGUUAGCCUGCCCCUUUUUGGUUCCCAAAUGAGGUAACUUCUUCAGGCUACCAUUGGGGCAGUCUGCUCUUUCACCGUGAUAGGAGUCAGGAUAAGUUUUUC