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BaseInfo

ncRNA ID novel_jre_miR243
Species Juglans regia
Class miRNA
Genome position NW_017388856.1:943131-943280 [+]
Reference genome wgs.5d
Source SRR1170955
Length 24
Mature sequence(if miRNA) 1 - UGCAGUCGUAAGUGUGCAAGCGCC - 24
Stem-loop(if miRNA) --         -A          C  C   C               -    ---AAUAAAUA  AGACCCACAUGAA
  UGCAGUCGU  AGUGUGCAAG GC GUG AGUCGCUUUGAAAAA AGUG           UG             A
  |||||||||  |||||||||| || ||| ||||||||||||||| ||||           ||             A
  AUGUCAGCA  UUACGCGUUU CG CAC UCAGCGAAACUUUUU UCAC           AU             G
GU         CC          U  A   A               C    CCCAGAUGAUA  UUUUUUAAUUAAA
Stem-loop sequence UGCAGUCGUAAGUGUGCAAGCGCCGUGCAGUCGCUUUGAAAAAAGUGAAUAAAUAUGAGACCCACAUGAAAAGAAAUUAAUUUUUUUAAUAGUAGACCCCACUCUUUUUCAAAGCGACUACACAGCUUUUGCGCAUUCCACGACUGUAUG