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BaseInfo

ncRNA ID	novel_jre_miR239
Species	Juglans regia
Class	miRNA
Genome position	NW_017389587.1:78066-78188 [+]
Reference genome	wgs.5d
Source	SRR1170955;SRR1170960;SRR1170964
Length	24
Mature sequence(if miRNA)	100 - AAAAGAAUAUGCAAAAGUGACUGC - 123
Stem-loop(if miRNA)	--               CUA    -CA                   AUUAAAACAG   UUU   AGUCAUUUUUGCAUG   UUUU   UAUUUUACUAAUGUGAUUG          UUA   U   |||||||||||||||   ||||   |||||||||||||||||||          |||   UCAGUGAAAACGUAU   AAAA   AUGAGAUGAUUAUACUAAC          AAU   A CG               AAG    UAC                   CGACAUAAAA   UAU
Stem-loop sequence	AGUCAUUUUUGCAUGCUAUUUUCAUAUUUUACUAAUGUGAUUGAUUAAAACAGUUAUUUUAUAUUAAAAAAUACAGCCAAUCAUAUUAGUAGAGUACAUAAAAGAAUAUGCAAAAGUGACUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018985920.1	ncRNA:24   CGUCAGUGAAAACGUAUAAGAAAA   1   ||**|==|*||||||||||||||| targets:929   GCUAUUGCCUUUGCAUAUUCUUUU   952 Target Full Sequence	3.0	PREDICTED: Juglans regia amino acid permease 3-like (LOC109006590), mRNA	NA	coding protein	psRNATarget