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BaseInfo

ncRNA ID	novel_jre_miR237
Species	Juglans regia
Class	miRNA
Genome position	NW_017389545.1:573331-573495 [-]
Reference genome	wgs.5d
Source	SRR1170955;SRR1168880;SRR1170966;SRR1170969;SRR1168881
Length	24
Mature sequence(if miRNA)	1 - AUUCCAUGACUGUAUGUAGCAUUA - 24
Stem-loop(if miRNA)	--   A   U          -      C   C  C                   --A  GAAUAAAUAUGAGAUCUACAUGAAA   AUG UAC UACAGUCGUG AGUGUG AAG GU GUGCAGUUGCUUUGAAAAA   AU                         A   ||| ||| |||||||||| |||||| ||| || |||||||||||||||||||   ||   UAC AUG AUGUCAGUAC UUAUGC UUU CG CAUGUCAGCGAAACUUUUU   AC                         G AU   G   U          C      A   A  A                   CUC  CCUAGGUGAUAAUUUUUUAAUUAAA
Stem-loop sequence	AUGAUACUUACAGUCGUGAGUGUGCAAGCGUCGUGCAGUUGCUUUGAAAAAAAUGAAUAAAUAUGAGAUCUACAUGAAAAGAAAUUAAUUUUUUAAUAGUGGAUCCCACUCUUUUUCAAAGCGACUGUACAGCAUUUACGUAUUCCAUGACUGUAUGUAGCAUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018964869.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1051   UAAUGCUACAUACAGUUAUGGAAU   1074 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC108990784), mRNA	NA	coding protein	psRNATarget
XM_018980788.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1580   UAAUGCUACAUACAGUUAUGGAAU   1603 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018980787.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1653   UAAUGCUACAUACAGUUAUGGAAU   1676 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018980786.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1877   UAAUGCUACAUACAGUUAUGGAAU   1900 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018969255.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   |||||=||||||||||||||||=| targets:1886   UAAUGUUACAUACAGUCAUGGAGU   1909 Target Full Sequence	2.5	PREDICTED: Juglans regia CTP synthase-like (LOC108994151), transcript variant X1, mRNA	NA	coding protein	psRNATarget