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BaseInfo

ncRNA ID	novel_jre_miR236
Species	Juglans regia
Class	miRNA
Genome position	NW_017389536.1:216074-216238 [+]
Reference genome	wgs.5d
Source	SRR1170955
Length	24
Mature sequence(if miRNA)	142 - AUUCCACGACUGUAUAUAACAUUA - 165
Stem-loop(if miRNA)	--   A  CU          -                                 AGUGAAUAAAU     A  C  ---AU      AA   AUG UA  UGCAGUCGUG AGUGUGCAAGCGUCGUGCAGUCGCUUUGAAAAA           AUGGA UC AC     GAAAAU  A   ||| ||  |||||||||| |||||||||||||||||||||||||||||||||           ||||| || ||     ||||||   UAC AU  AUGUCAGCAC UUACGCGUUUGCGGCAUGUCAGCGAAAUUUUUU           UACCU AG UG     UUUUUA  U AU   A  AU          C                                 ---------AU     C  A  AUAAU      AU
Stem-loop sequence	AUGAUACUUGCAGUCGUGAGUGUGCAAGCGUCGUGCAGUCGCUUUGAAAAAAGUGAAUAAAUAUGGAAUCCACAUGAAAAUAAAUUAAUUUUUUAAUAGUAGACUCCAUUAUUUUUUAAAGCGACUGUACGGCGUUUGCGCAUUCCACGACUGUAUAUAACAUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018967640.1	ncRNA:24   AUUACAAUAUAUGUCAGCACCUUA   1   ||||||||*|||=||||||||||| targets:2069   UAAUGUUACAUAUAGUCGUGGAAU   2092 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108992921 (LOC108992921), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018967641.1	ncRNA:24   AUUACAAUAUAUGUCAGCACCUUA   1   ||||||||*|||=||||||||||| targets:2119   UAAUGUUACAUAUAGUCGUGGAAU   2142 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108992921 (LOC108992921), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018974968.1	ncRNA:24   AUUACAAUAUAUGUCAGCACCUUA   1   ||||||||*|||||||||||*||| targets:1089   UAAUGUUACAUACAGUCGUGAAAU   1112 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108998416 (LOC108998416), mRNA	NA	coding protein	psRNATarget