ncRNA ID | novel_jre_miR230 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389269.1:262616-262679 [-] |
Reference genome | wgs.5d |
Source | SRR1170955;SRR1170965;SRR1170966;SRR1168883 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCGAGCGAACCACUCUGGAAGGU - 24 |
Stem-loop(if miRNA) |
-UAC  UG  -A    U       ---     GC     UC  GA  GGUU CGCUCGA   GCGCU  G     ||  ||  |||| |||||||   |||||     AG  CU  CCAA GCGAGCU   CGCGA  U UGGA  GU  CA    -       ACA     GC |
Stem-loop sequence | UACUCUGGAAGGUUUCGCUCGAGCGCUGCGUCGAGCGCACAUCGAGCGAACCACUCUGGAAGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018977967.1 |
|
3.0 | PREDICTED: Juglans regia hydroxyacylglutathione hydrolase cytoplasmic (LOC109000916), mRNA | NA | coding protein | psRNATarget |