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BaseInfo

ncRNA ID novel_jre_miR225
Species Juglans regia
Class miRNA
Genome position NW_017388999.1:185739-185905 [-]
Reference genome wgs.5d
Source SRR1170955
Length 24
Mature sequence(if miRNA) 144 - AUGAUAGAUGCAGUCAUGAGUAUG - 167
Stem-loop(if miRNA) --   A  G        A   -           A   ---      A               AAUAAA   GGGAC  AUAUGAAAAA
  AUG UA AUGCAGUC UGA GUAUGUAAGUG CGU   GCAAUC UUUUGAAAAAAAGUG      UAC     UC          A
  ||| || |||||||| ||| ||||||||||| |||   |||||| |||||||||||||||      |||     ||
  UAC AU UAUGUUAG ACU CAUAUGUUUGC GCA   CGUUAG AAAACUUUUUUUUAU      AUG     UA          U
AU   G  G        C   U           A   AUA      C               -ACUAG   ----A  AUUUUUUAAU
Stem-loop sequence AUGAUAGAUGCAGUCAUGAGUAUGUAAGUGACGUGCAAUCAUUUUGAAAAAAAGUGAAUAAAUACGGGACUCAUAUGAAAAAAUUAAUUUUUUAAUAGUAGAUCAUAUUUUUUUUCAAAACGAUUGCAUAACGACGUUUGUAUACUUCACGAUUGUAUGUAGCAUUA