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BaseInfo

ncRNA ID	novel_jre_miR215
Species	Juglans regia
Class	miRNA
Genome position	NW_017388965.1:1049551-1049712 [+]
Reference genome	wgs.5d
Source	SRR1168887
Length	24
Mature sequence(if miRNA)	139 - CACUCCAUGACUGUAUAUAACAUU - 162
Stem-loop(if miRNA)	--  A   U                           A     -           -  -    AAA   -------    --U   CAU   UG UAU UAUAGUCGUGGAGUGCAUAAGUGCCAC CAAUC UUUUGAAAAAU GU GAGU   UAC       GAGA   GAC   U   || ||| ||||||||||||||||||||||||||| ||||| ||||||||||| || ||||   |||       ||||   |||   AC AUA AUGUCAGUACCUCACGUGUUCAUGGUG GUUAG AAAACUUUUUA CA CUCG   AUG       UUCU   UUG   U UU  A   U                           C     C           U  U    --G   AAAAUUU    UUU   AAG
Stem-loop sequence	UGAUAUUUAUAGUCGUGGAGUGCAUAAGUGCCACACAAUCUUUUGAAAAAUGUGAGUAAAUACGAGAUGACCAUUUGAAGUUUUUUCUUUUUAAAAGUAGGCUCUACUAUUUUUCAAAACGAUUGCGUGGUACUUGUGCACUCCAUGACUGUAUAUAACAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018969255.1	ncRNA:24   UUACAAUAUAUGUCAGUACCUCAC   1   |||||||*|||||||||||||||| targets:1887   AAUGUUACAUACAGUCAUGGAGUG   1910 Target Full Sequence	1.0	PREDICTED: Juglans regia CTP synthase-like (LOC108994151), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018994468.1	ncRNA:24   UUACAAUAUAUGUCAGUACCUCAC   1   ||||*||*||||||||=||||||| targets:1425   AAUGCUACAUACAGUCGUGGAGUG   1448 Target Full Sequence	2.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase PP1-like (LOC109012694), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_018967577.1	ncRNA:24   UUACAAUAUAUGUCAGUACCUCAC   1   =*||||||**|||||||||||||* targets:456   GCUGUUAUCCACAGUCAUGGAGUU   479 Target Full Sequence	3.0	PREDICTED: Juglans regia probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 (LOC108992851), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_018967568.1	ncRNA:24   UUACAAUAUAUGUCAGUACCUCAC   1   =*||||||**|||||||||||||* targets:482   GCUGUUAUCCACAGUCAUGGAGUU   505 Target Full Sequence	3.0	PREDICTED: Juglans regia probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 (LOC108992851), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018967559.1	ncRNA:24   UUACAAUAUAUGUCAGUACCUCAC   1   =*||||||**|||||||||||||* targets:483   GCUGUUAUCCACAGUCAUGGAGUU   506 Target Full Sequence	3.0	PREDICTED: Juglans regia probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 (LOC108992851), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018967549.1	ncRNA:24   UUACAAUAUAUGUCAGUACCUCAC   1   =*||||||**|||||||||||||* targets:455   GCUGUUAUCCACAGUCAUGGAGUU   478 Target Full Sequence	3.0	PREDICTED: Juglans regia probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 (LOC108992851), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018967541.1	ncRNA:24   UUACAAUAUAUGUCAGUACCUCAC   1   =*||||||**|||||||||||||* targets:480   GCUGUUAUCCACAGUCAUGGAGUU   503 Target Full Sequence	3.0	PREDICTED: Juglans regia probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 (LOC108992851), transcript variant X1, mRNA	NA	coding protein	psRNATarget