ncRNA ID | novel_jre_miR206 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443621.1:683781-683889 [+] |
Reference genome | wgs.5d |
Source | SRR1168887;SRR1170955;SRR1170960;SRR1170961;SRR1170962;SRR1170963;SRR1170964;SRR1170965;SRR1170966;SRR1170967;SRR1170968;SRR1168880;SRR1170969;SRR1170970;SRR1168881;SRR1168883;SRR1168884;SRR1168886 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UCCAAAGGGAUCGCAUUGAUCU - 22 |
Stem-loop(if miRNA) |
--   A            U    UG   UUCAUC  U  CC       UC  CG   G   UCC AAGGGAUCGCAU GAUC  AUG      GA GC  AAAUGAG  CG  GCU C   ||| |||||||||||| ||||  |||      || ||  |||||||  ||  ||| U   AGG UUCCCUAGCGUA CUAG  UAC      CU CG  UUUACUU  GC  UGG U GA   A            -    GU   ---UAA  -  -U       --  UU   U |
Stem-loop sequence | UCCAAAGGGAUCGCAUUGAUCUGAUGUUCAUCGAUGCCCAAAUGAGUCCGCGGCUGCUUUGGUUUCGUUCAUUUUGCUCAAUCAUUGGAUCAUGCGAUCCCUUAGGAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018964391.1 |
|
2.0 | PREDICTED: Juglans regia antifungal protein ginkbilobin-2-like (LOC108990426), mRNA | NA | coding protein | psRNATarget |