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BaseInfo

ncRNA ID	novel_jre_miR202
Species	Juglans regia
Class	miRNA
Genome position	NW_017443612.1:566953-567043 [+]
Reference genome	wgs.5d
Source	SRR1168887
Length	24
Mature sequence(if miRNA)	68 - AUAAGAAUGAUGAGUAGAAGAACU - 91
Stem-loop(if miRNA)	--AAA             -  C    C            UUUAUUU      UUUUAUUCAUCAU CU UAUA CACACACUUGUU       U      ||||||||||||| || |||| ||||||||||||       U      AAGAUGAGUAGUA GA AUAU GUGUGUGGACAA       U UCAAG             A  -    A            UUCCUCU
Stem-loop sequence	AAAUUUUAUUCAUCAUCUCUAUACCACACACUUGUUUUUAUUUUUUUCUCCUUAACAGGUGUGUGAUAUAAGAAUGAUGAGUAGAAGAACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018990814.1	ncRNA:24   UCAAGAAGAUGAGUAGUAAGAAUA   1   |||**||=|||||||||||||||* targets:1291   AGUCAUUUUACUCAUCAUUCUUAC   1314 Target Full Sequence	2.0	PREDICTED: Juglans regia CASP-like protein 2A1 (LOC109010097), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018990813.1	ncRNA:24   UCAAGAAGAUGAGUAGUAAGAAUA   1   |||**||=|||||||||||||||* targets:1337   AGUCAUUUUACUCAUCAUUCUUAC   1360 Target Full Sequence	2.0	PREDICTED: Juglans regia CASP-like protein 2A1 (LOC109010097), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018976948.1	ncRNA:24   UCAAGAAGAUGAGUAGUAAGAAUA   1   **|||||=|*|||||||||||||* targets:1397   CUUUCUUUUCCUCAUCAUUCUUAG   1420 Target Full Sequence	3.0	PREDICTED: Juglans regia pectin acetylesterase 8-like (LOC109000095), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018976961.1	ncRNA:24   UCAAGAAGAUGAGUAGUAAGAAUA   1   **|||||=|*|||||||||||||* targets:1408   CUUUCUUUUCCUCAUCAUUCUUAG   1431 Target Full Sequence	3.0	PREDICTED: Juglans regia pectin acetylesterase 8-like (LOC109000095), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018976942.1	ncRNA:24   UCAAGAAGAUGAGUAGUAAGAAUA   1   **|||||=|*|||||||||||||* targets:1450   CUUUCUUUUCCUCAUCAUUCUUAG   1473 Target Full Sequence	3.0	PREDICTED: Juglans regia pectin acetylesterase 8-like (LOC109000095), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018976955.1	ncRNA:24   UCAAGAAGAUGAGUAGUAAGAAUA   1   **|||||=|*|||||||||||||* targets:1488   CUUUCUUUUCCUCAUCAUUCUUAG   1511 Target Full Sequence	3.0	PREDICTED: Juglans regia pectin acetylesterase 8-like (LOC109000095), transcript variant X3, mRNA	NA	coding protein	psRNATarget