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BaseInfo

ncRNA ID	novel_jre_miR198
Species	Juglans regia
Class	miRNA
Genome position	NW_017443605.1:246091-246162 [+]
Reference genome	wgs.5d
Source	SRR1168887;SRR1170955;SRR1170956;SRR1170957;SRR1168796;SRR1170958;SRR1170959;SRR1170960;SRR1170961;SRR1170962;SRR1170963;SRR1170964;SRR1170965;SRR1170966;SRR1170967;SRR1170968;SRR1168880;SRR1170969;SRR1170970;SRR1168795;SRR1168881;SRR1168883;SRR1168884;SRR1168886
Length	22
Mature sequence(if miRNA)	51 - UCUUUCCUAGUCCUCCCAUUCC - 72
Stem-loop(if miRNA)	--       U   -           ----UAAA    U   AAUGGGA GGC AGGAAAGAAAA        UCUG U   ||||||| ||| |||||||||||        |||| C   UUACCCU CUG UCCUUUCUUUU        AGAC G CC       C   A           UUAUACAA    U
Stem-loop sequence	AAUGGGAUGGCAGGAAAGAAAAUAAAUCUGUUCGUCAGAAACAUAUUUUUUCUUUCCUAGUCCUCCCAUUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018976503.1	ncRNA:22   CCUUACCCUCCUGAUCCUUUCU   1   ||*||*||||||=||||||||| targets:592   GGCAUCGGAGGAUUAGGAAAGA   613 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA3 (LOC108999602), partial mRNA	NA	coding protein	psRNATarget
XM_018969815.1	ncRNA:22   CCUUACCCUCCUGAUCCUUUCU   1   ||*||*||||||=||||||||| targets:634   GGCAUCGGAGGAUUAGGAAAGA   655 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA3 (LOC108994564), mRNA	NA	coding protein	psRNATarget
XM_018969905.1	ncRNA:22   CCUUACCCUCCUGAUCCUUUCU   1   ||*||*||||||=||||||||| targets:958   GGCAUCGGAGGAUUAGGAAAGA   979 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA3 (LOC108994623), mRNA	NA	coding protein	psRNATarget
XM_018969904.1	ncRNA:22   CCUUACCCUCCUGAUCCUUUCU   1   ||*||*||||||=||||||||| targets:672   GGCAUCGGAGGAUUAGGAAAGA   693 Target Full Sequence	2.5	PREDICTED: Juglans regia disease resistance protein RGA2-like (LOC108994622), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018969903.1	ncRNA:22   CCUUACCCUCCUGAUCCUUUCU   1   ||*||*||||||=||||||||| targets:759   GGCAUCGGAGGAUUAGGAAAGA   780 Target Full Sequence	2.5	PREDICTED: Juglans regia disease resistance protein RGA2-like (LOC108994622), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018969898.1	ncRNA:22   CCUUACCCUCCUGAUCCUUUCU   1   ||*||*||||||=||||||||| targets:919   GGCAUCGGAGGAUUAGGAAAGA   940 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA1 (LOC108994619), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_018974438.1	ncRNA:22   CCUUACCCUCCUGAUCCUUUCU   1   ||*||*||||||=||||||||| targets:678   GGCAUCGGAGGAUUAGGAAAGA   699 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA3 (LOC108998016), mRNA	NA	coding protein	psRNATarget
XM_018969895.1	ncRNA:22   CCUUACCCUCCUGAUCCUUUCU   1   ||*||*||||||=||||||||| targets:803   GGCAUCGGAGGAUUAGGAAAGA   824 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA1 (LOC108994619), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018976704.1	ncRNA:22   CCUUACCCUCCUGAUCCUUUCU   1   ||*||*||||||=||||||||| targets:14   GGCAUCGGAGGAUUAGGAAAGA   35 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA4 (LOC108999812), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018969897.1	ncRNA:22   CCUUACCCUCCUGAUCCUUUCU   1   ||*||*||||||=||||||||| targets:915   GGCAUCGGAGGAUUAGGAAAGA   936 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA1 (LOC108994619), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018976703.1	ncRNA:22   CCUUACCCUCCUGAUCCUUUCU   1   ||*||*||||||=||||||||| targets:14   GGCAUCGGAGGAUUAGGAAAGA   35 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA4 (LOC108999812), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_019003449.1	ncRNA:22   CCUUACCCUCCUGAUCCUUUCU   1   ||=|||||*||||||||*|||| targets:731   GGGAUGGGUGGACUAGGCAAGA   752 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein At1g50180 (LOC109020918), mRNA	NA	coding protein	psRNATarget
XM_018969894.1	ncRNA:22   CCUUACCCUCCUGAUCCUUUCU   1   ||*||*||||||=||||||||| targets:715   GGCAUCGGAGGAUUAGGAAAGA   736 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA3 (LOC108994617), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_018969893.1	ncRNA:22   CCUUACCCUCCUGAUCCUUUCU   1   ||*||*||||||=||||||||| targets:715   GGCAUCGGAGGAUUAGGAAAGA   736 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA3 (LOC108994617), transcript variant X4, mRNA	NA	coding protein	psRNATarget