Search result

BaseInfo

ncRNA ID novel_jre_miR197
Species Juglans regia
Class miRNA
Genome position NW_017443605.1:239713-239781 [+]
Reference genome wgs.5d
Source SRR1168887;SRR1170955;SRR1170956;SRR1170957;SRR1168796;SRR1170958;SRR1170959;SRR1170960;SRR1170961;SRR1170962;SRR1170963;SRR1170964;SRR1170965;SRR1170966;SRR1170967;SRR1170968;SRR1168880;SRR1170969;SRR1170970;SRR1168795;SRR1168881;SRR1168883;SRR1168884;SRR1168886
Length 22
Mature sequence(if miRNA) 48 - UUGCCAAUUCCACCCAUUCCAA - 69
Stem-loop(if miRNA) --   C       -           AAAAGAUAUA
  GGA AUGGGUG AAUUGGUAAGG          U
  ||| ||||||| |||||||||||          G
  CCU UACCCAC UUAACCGUUCC          C
AA   -       C           CUCACUCGCU
Stem-loop sequence GGACAUGGGUGAAUUGGUAAGGAAAAGAUAUAUGCUCGCUCACUCCCUUGCCAAUUCCACCCAUUCCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019002156.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  |||||=|*||||||||||||||
targets:693   UUGGAGUUGGUGGAAUUGGCAA   714

2.0 PREDICTED: Juglans regia TMV resistance protein N-like (LOC109019787), partial mRNA NA coding protein psRNATarget
XM_018997203.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  |||||=|*||||||||||||||
targets:729   UUGGAGUUGGUGGAAUUGGCAA   750

2.0 PREDICTED: Juglans regia disease resistance protein RRS1-like (LOC109014710), transcript variant X1, mRNA NA coding protein psRNATarget
XM_018959206.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  *|||=||||||||||||||=||
targets:713   AUGGGAUGGGUGGAAUUGGUAA   734

2.5 PREDICTED: Juglans regia TMV resistance protein N-like (LOC108986558), partial mRNA NA coding protein psRNATarget
XM_018974885.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  |||||||*|||||||||||=||
targets:709   UUGGAAUCGGUGGAAUUGGUAA   730

2.5 PREDICTED: Juglans regia TMV resistance protein N-like (LOC108998353), transcript variant X2, mRNA NA coding protein psRNATarget
XM_018974884.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  |||||||*|||||||||||=||
targets:709   UUGGAAUCGGUGGAAUUGGUAA   730

2.5 PREDICTED: Juglans regia TMV resistance protein N-like (LOC108998353), transcript variant X1, mRNA NA coding protein psRNATarget
XM_018992685.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  *||||||*|||||||||||=||
targets:751   AUGGAAUUGGUGGAAUUGGUAA   772

2.5 PREDICTED: Juglans regia TMV resistance protein N-like (LOC109011464), transcript variant X2, mRNA NA coding protein psRNATarget
XM_018992686.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  *||||||*|||||||||||=||
targets:751   AUGGAAUUGGUGGAAUUGGUAA   772

2.5 PREDICTED: Juglans regia TMV resistance protein N-like (LOC109011464), transcript variant X3, mRNA NA coding protein psRNATarget
XM_018992688.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  *||||||*|||||||||||=||
targets:752   AUGGAAUUGGUGGAAUUGGUAA   773

2.5 PREDICTED: Juglans regia TMV resistance protein N-like (LOC109011464), transcript variant X5, mRNA NA coding protein psRNATarget
XM_018992687.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  *||||||*|||||||||||=||
targets:752   AUGGAAUUGGUGGAAUUGGUAA   773

2.5 PREDICTED: Juglans regia TMV resistance protein N-like (LOC109011464), transcript variant X4, mRNA NA coding protein psRNATarget
XM_018992684.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  *||||||*|||||||||||=||
targets:751   AUGGAAUUGGUGGAAUUGGUAA   772

2.5 PREDICTED: Juglans regia TMV resistance protein N-like (LOC109011464), transcript variant X1, mRNA NA coding protein psRNATarget
XM_018960243.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  ||||*|||||*|||||||||||
targets:542   UUGGCAUGGGGGGAAUUGGCAA   563

2.5 PREDICTED: Juglans regia putative disease resistance RPP13-like protein 1 (LOC108987339), mRNA NA coding protein psRNATarget
XM_018972746.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  |||||||*|||||||||||*||
targets:769   UUGGAAUUGGUGGAAUUGGAAA   790

2.5 PREDICTED: Juglans regia TMV resistance protein N-like (LOC108996729), transcript variant X9, mRNA NA coding protein psRNATarget
XM_018972744.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  |||||||*|||||||||||*||
targets:769   UUGGAAUUGGUGGAAUUGGAAA   790

2.5 PREDICTED: Juglans regia TMV resistance protein N-like (LOC108996729), transcript variant X4, mRNA NA coding protein psRNATarget
XM_018972743.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  |||||||*|||||||||||*||
targets:770   UUGGAAUUGGUGGAAUUGGAAA   791

2.5 PREDICTED: Juglans regia TMV resistance protein N-like (LOC108996729), transcript variant X1, mRNA NA coding protein psRNATarget
XM_018994867.1
ncRNA:22   AA-CCUUACCCACCUUAACCGUU   1
  ||-|||||*|||||||||||=||
targets:766   UUCGGAAUUGGUGGAAUUGGUAA   788

2.5 PREDICTED: Juglans regia TMV resistance protein N-like (LOC109012971), mRNA NA coding protein psRNATarget
XM_018982645.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  |*||*|||||*|||||||||||
targets:936   UCGGCAUGGGGGGAAUUGGCAA   957

2.5 PREDICTED: Juglans regia putative disease resistance RPP13-like protein 1 (LOC109004180), transcript variant X2, mRNA NA coding protein psRNATarget
XM_018982644.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  |*||*|||||*|||||||||||
targets:936   UCGGCAUGGGGGGAAUUGGCAA   957

2.5 PREDICTED: Juglans regia putative disease resistance RPP13-like protein 1 (LOC109004180), transcript variant X1, mRNA NA coding protein psRNATarget
XM_018962592.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  |*||*|||||*|||||||||||
targets:740   UCGGCAUGGGGGGAAUUGGCAA   761

2.5 PREDICTED: Juglans regia putative disease resistance protein At3g14460 (LOC108989080), transcript variant X5, mRNA NA coding protein psRNATarget
XM_018962575.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  |*||*|||||*|||||||||||
targets:740   UCGGCAUGGGGGGAAUUGGCAA   761

2.5 PREDICTED: Juglans regia putative disease resistance protein At3g14460 (LOC108989080), transcript variant X3, mRNA NA coding protein psRNATarget
XM_018962570.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  |*||*|||||*|||||||||||
targets:740   UCGGCAUGGGGGGAAUUGGCAA   761

2.5 PREDICTED: Juglans regia putative disease resistance protein At3g14460 (LOC108989080), transcript variant X2, mRNA NA coding protein psRNATarget
XM_018962585.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  |*||*|||||*|||||||||||
targets:740   UCGGCAUGGGGGGAAUUGGCAA   761

2.5 PREDICTED: Juglans regia putative disease resistance protein At3g14460 (LOC108989080), transcript variant X4, mRNA NA coding protein psRNATarget
XM_018962565.1
ncRNA:22   AACCUUACCCACCUUAACCGUU   1
  |*||*|||||*|||||||||||
targets:740   UCGGCAUGGGGGGAAUUGGCAA   761

2.5 PREDICTED: Juglans regia putative disease resistance protein At3g14460 (LOC108989080), transcript variant X1, mRNA NA coding protein psRNATarget
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