Search result

BaseInfo

ncRNA ID	novel_jre_miR195
Species	Juglans regia
Class	miRNA
Genome position	NW_017441207.1:17887-17995 [+]
Reference genome	wgs.5d
Source	SRR1168796
Length	24
Mature sequence(if miRNA)	86 - UUUCAAAGUGAUUGUACGACGCUU - 109
Stem-loop(if miRNA)	--                  A      ----------        UAU   UAA     UA   GUGUCGUGCAGUCGUUUU AAAAAA          AUGAGAUU   UAU   AAAAU  A   |||||||||||||||||| ||||||          ||||||||   |||   |||||   CGCAGCAUGUUAGUGAAA UUUUUU          UGCUCUAG   GUA   UUUUA  U UU                  C      CAUUUAUUUA        -UU   --C     UU
Stem-loop sequence	GUGUCGUGCAGUCGUUUUAAAAAAAAUGAGAUUUAUUAUUAAAAAAUUAAUUUAUUUUCAUGUUGAUCUCGUAUUUAUUUACUUUUUUCAAAGUGAUUGUACGACGCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018968065.1	ncRNA:24   UUCGCAGCAUGUUAGUGAAACUUU   1   *=|=*||||||*|||||||||||= targets:991   UGGUUUCGUACCAUCACUUUGAAG   1014 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108993227 (LOC108993227), mRNA	NA	coding protein	psRNATarget