Search result

BaseInfo

ncRNA ID novel_jre_miR193
Species Juglans regia
Class miRNA
Genome position NW_017443598.1:553587-553651 [-]
Reference genome wgs.5d
Source SRR1168887
Length 24
Mature sequence(if miRNA) 1 - AGUAGAGUUGGGUUGGGUUAUGCU - 24
Stem-loop(if miRNA) --      A    A G        --G GA   G
  UAUGAC UAGC C GACUUUAU   G  UGG G
  |||||| |||| | ||||||||   |  |||
  GUAUUG GUUG G UUGAGAUG   U  GUC U
UC      G    - G        AGA GG   G
Stem-loop sequence UAUGACAUAGCACGGACUUUAUGGGAUGGGGUGCUGGGUAGAGUAGAGUUGGGUUGGGUUAUGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018961474.1
ncRNA:24   UCGUAUU-GGGUUGGGUUGAGAUGA   1
  |*=||||-||||||||||||||||*
targets:59   ACUAUAAGCCCAACCCAACUCUACC   83

3.0 PREDICTED: Juglans regia protein OBERON 4-like (LOC108988256), mRNA NA coding protein psRNATarget